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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49705028 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01676183_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 12 - Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 BAD92121.1
AF357970.1 AAL99615.1
AK074389.1 BAB85068.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss CPT1C ADM5 SCAF1 RRAS NOSIP MIR5088 IRF3 BCL2L12 PRR12 PRMT1 PRRG2
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss CPT1C ADM5 SCAF1 RRAS NOSIP MIR5088 IRF3 BCL2L12 PRR12 PRMT1 PRRG2
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss CPT1C DBP NOSIP LOC101059948 SEC1P FUT1 PLA2G4C-AS1 KCNA7 SNAR-A12 GFY SNAR-C5 DHDH LOC100287477 FLJ26850 SLC17A7 CGB7 PTOV1 SNAR-A10 MIR5088 NTF4 LOC101928295 RPL18 CARD8-AS1 GRIN2D NUCB1-AS1 SNAR-C3 CGB3 AKT1S1 IZUMO1 RASIP1 ELSPBP1 SLC6A16 BSPH1 TMEM143 FTL SNAR-A9 FUZ MIR6798 RPS11 SNAR-G1 PRRG2 LOC105447645 ALDH16A1 LMTK3 TSKS GYS1 FGF21 SNORD33 SNRNP70 PTOV1-AS1 GRWD1 SNAR-A2 PNKP SNORD32A TEAD2 SNAR-C4 SNAR-A3 PTOV1-AS2 KDELR1 CGB5 IRF3 IL4I1 TULP2 SNAR-G2 CCDC114 SNAR-B1 SNAR-C1 KCNJ14 TBC1D17 VRK3 AP2A1 MIR4324 EMP3 ADM5 PPFIA3 MIR4751 SNAR-B2 CGB2 LHB BCL2L12 SPHK2 SNAR-D NTN5 FCGRT PTH2 SCAF1 HSD17B14 CCDC155 PLEKHA4 SNAR-A5 SNAR-A6 FUT2 PRMT1 FAM83E BCAT2 SIGLEC11 HRC C19orf73 PRR12 SNORD34 SYNGR4 SULT2B1 SNAR-A4 ZNF473 CA11 SNAR-A13 NUCB1 RCN3 C19orf68 RRAS SNAR-A14 MIR4750 ZNF114 CARD8 RUVBL2 SNAR-A7 MED25 CABP5 SNAR-A11 SNAR-C2 CGB8 MIR6799 MAMSTR SNORD35A CGB1 BAX RPL13A LIG1 LOC105372430 SNAR-A8 SNORD35B DKKL1 NUP62 FLT3LG MIR4749 CYTH2 CD37 PIH1D1 MIR6800 SIGLEC16 ATF5 PLA2G4C LIN7B PPP1R15A TRPM4 SNAR-A1 SPACA4 MIR150
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain CPT1C ADM5 SCAF1 RRAS MIR5088 IRF3 BCL2L12 PRR12 PRMT1
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion CPT1C TBC1D17 RRAS NOSIP MIR4750 FUZ AP2A1 MED25 PRRG2 MIR6799 ADM5 MIR4751 TSKS BCL2L12 PTOV1-AS1 PTOV1 SCAF1 PNKP MIR5088 NUP62 MIR4749 PRMT1 MIR6800 AKT1S1 PTOV1-AS2 ATF5 IRF3 PRR12 IL4I1
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain CPT1C ADM5 SCAF1 RRAS NOSIP MIR5088 IRF3 BCL2L12 PRR12 PRMT1 PRRG2
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion CPT1C RCN3 RRAS NOSIP FUZ AP2A1 MED25 RPS11 PRRG2 MIR6799 ADM5 TSKS SNORD35A BCL2L12 RPL13A SNORD33 PTOV1-AS1 FCGRT SCAF1 MIR5088 SNORD32A SNORD35B PRMT1 MIR6800 IRF3 PRR12 SNORD34 MIR150

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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