Name: [Hs01686114_cn] [LITAF]
Creator: Thermo Fisher Scientific
Keywords: [LITAF] Assay, [lipopolysaccharide induced TNF factor] Assay

Genomic Map

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Assay Details

Entrez Gene ID:	9516
Gene Name:	lipopolysaccharide induced TNF factor
Gene Aliases:	PIG7, SIMPLE, TP53I7
Location:	Chr.16:11547722-11636377 on Build GRCh38
Assay Gene Location:	Within Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LITAF	NM_001136472.1	2	107	NP_001129944.1
	NM_001136473.1	2	107	NP_001129945.1
	NM_004862.3	2	270	NP_004853.2
	NR_024320.1	2	171
	XM_006720982.2	2	181	XP_006721045.1
	XM_006720983.3	2	471	XP_006721046.1
	XM_006720984.3	2	223	XP_006721047.1
	XM_006720985.3	2	185	XP_006721048.1
	XM_011522754.2	4	584	XP_011521056.1
	XM_017023896.1	2	130	XP_016879385.1
	AB034747.1	2	270	BAB32547.1
	AF010312.1	2	115	AAC39530.1
	AK095955.1	2	107
	AK130788.1	2	107
	AK314519.1	2	107
	BC000053.2	2	89
	BC008309.1	2	63	AAH08309.1
	BC016491.1	2	62	AAH16491.1
	BC039840.1	2	58	AAH39840.1
	BC046154.1	1	54	AAH46154.1
	BC096063.1	2	190	AAH96063.1
	BC096065.1	2	188	AAH96065.1
	BC096066.1	2	188	AAH96066.1
	BC101401.1	2	188	AAI01402.1
	BC101402.1	2	189	AAI01403.1
	BC101969.1	2	189	AAI01970.1
	BI858484.1	2	134
	BX537543.1	2	172	CAD97778.1
	DA955452.1	2	310
	U77396.1	2	270	AAB36550.1

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv524676	Chr.16:11475598 - 11701723 on Build GRCh38	Loss	LITAF LOC400499 SNN TXNDC11
nsv457409	Chr.16:11449038 - 11728210 on Build GRCh38	Gain	LITAF LOC400499 SNN LOC101927131 TXNDC11