Hs01702561_cn

• Gene Symbol: TM4SF19
• Assay Reference Genome Location: Chr.3:196338374 on build GRCh38
• Cytoband: 3q29

Target Gene Details

• Entrez Gene ID: 116211
• Gene Name: transmembrane 4 L six family member 19
• Gene Aliases: OCTM4
• Location: Chr.3:196323546-196338420 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19	NM_001204897.1			NP_001191826.1
	NM_001204898.1			NP_001191827.1
	NM_138461.3			NP_612470.2
	AF192910.1			AAQ13824.1
	AK310209.1
	BQ678650.1
	CA489370.1
	DB015357.1

Target Gene Details

• Entrez Gene ID: 100534611
• Gene Name: TM4SF19-TCTEX1D2 readthrough (NMD candidate)
• Gene Aliases: -
• Location: Chr.3:196316085-196338420 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TM4SF19-TCTEX1D2	NR_037950.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv997797	Chr.3:195931489 - 196486087 on Build GRCh38	Gain	PCYT1A RNF168 SDHAP1 UBXN7-AS1 LOC105374301 TM4SF19 TM4SF19-TCTEX1D2 ZDHHC19 TM4SF19-AS1 LINC00885 SLC51A UBXN7 TCTEX1D2 TFRC
nsv593083	Chr.3:196334911 - 196339698 on Build GRCh38	Gain	TM4SF19 TM4SF19-TCTEX1D2
nsv1009811	Chr.3:196124925 - 196411200 on Build GRCh38	Gain	TM4SF19 PCYT1A TM4SF19-TCTEX1D2 ZDHHC19 TM4SF19-AS1 LINC00885 SLC51A UBXN7 TCTEX1D2
nsv593071	Chr.3:196132016 - 196345571 on Build GRCh38	Gain	TM4SF19 PCYT1A TM4SF19-TCTEX1D2 ZDHHC19 TM4SF19-AS1 LINC00885 SLC51A TCTEX1D2
nsv4183	Chr.3:196307196 - 196352238 on Build GRCh38	Deletion	TM4SF19 TM4SF19-TCTEX1D2 TM4SF19-AS1 UBXN7 TCTEX1D2
esv2759213	Chr.3:195382058 - 196344722 on Build GRCh38	Gain+Loss	ACAP2 PCYT1A LINC00969 PPP1R2 MUC4 LOC105374299 LOC101929697 SDHAP1 APOD LOC105374297 LOC105374301 TM4SF19 TM4SF19-TCTEX1D2 ZDHHC19 TM4SF19-AS1 LINC00885 SDHAP2 MIR570 MUC20 SLC51A TCTEX1D2 TFRC TNK2 MIR6829

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation