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See other SSC4D CNV Assays ›
Gene Symbol
SSC4D
Assay Reference Genome
Location

Chr.7:76389871 on build GRCh38
Cytoband
7q11.23
Assay ID Hs01704872_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 136853

Gene Name:

 scavenger receptor cysteine rich family member with 4 domains

Gene Aliases:

 S4D-SRCRB, SRCRB-S4D, SRCRB4D

Location:

 Chr.7:76389329-76410025 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SSC4D NM_080744.1 11 2264 NP_542782.1
XM_017011750.1 8 2053 XP_016867239.1
AJ312755.1 11 2264 CAC84764.1
AK172783.1 11 2222 BAD18764.1
BC015651.2 4 857 AAH15651.1
BC113840.1 8 1746 AAI13841.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422494 Chr.7:76286900 - 76984449 on Build GRCh38 Duplication SPDYE16 LOC105375355 LOC100133091 YWHAG FDPSP2 POMZP3 ZP3 HSPB1 DTX2 SRRM3 DTX2P1-UPK3BP1-PMS2P11 SSC4D
nsv428174 Chr.7:76305019 - 77220062 on Build GRCh38 Gain FDPSP2 SPDYE17 DTX2 SSC4D SPDYE16 LOC105375355 LOC100133091 FGL2 YWHAG POMZP3 ZP3 PMS2P9 CCDC146 DTX2P1-UPK3BP1-PMS2P11 SPDYE18
nsv528969 Chr.7:75074053 - 76920728 on Build GRCh38 Gain STAG3L1 FDPSP2 CCL24 HIP1 LOC541473 SSC4D SPDYE16 LOC105375355 PMS2P10 NSUN5P1 ZP3 GTF2IP1 MIR4651 STYXL1 POR TMEM120A GTF2IP7 SPDYE5 LOC441259 MDH2 HSPB1 DTX2 SNORA14A PMS2P2 LOC100133091 YWHAG PMS2P3 NCF1C RHBDD2 CCL26 TRIM73 POMZP3 SRRM3 POM121C GTF2IRD2B LOC107986711
dgv232e55 Chr.7:76374650 - 77109274 on Build GRCh38 Gain SPDYE16 LOC105375355 LOC100133091 FDPSP2 POMZP3 ZP3 SPDYE17 DTX2 PMS2P9 DTX2P1-UPK3BP1-PMS2P11 SPDYE18 SSC4D
dgv233e55 Chr.7:76383349 - 77190972 on Build GRCh38 Loss FDPSP2 SPDYE17 DTX2 SSC4D SPDYE16 LOC105375355 LOC100133091 POMZP3 ZP3 PMS2P9 CCDC146 DTX2P1-UPK3BP1-PMS2P11 SPDYE18
nsv1028665 Chr.7:76336044 - 76445651 on Build GRCh38 Gain YWHAG ZP3 SSC4D
dgv120n16 Chr.7:75440769 - 76641919 on Build GRCh38 Deletion FDPSP2 CCL24 HIP1 SSC4D SPDYE16 LOC105375355 ZP3 MIR4651 STYXL1 POR TMEM120A GTF2IP7 SPDYE5 MDH2 HSPB1 DTX2 SNORA14A LOC100133091 YWHAG PMS2P3 RHBDD2 CCL26 POMZP3 SRRM3 POM121C LOC107986711

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

serine protease

Gene Ontology Categories:

Function(s) Process(es)


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