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See other CHMP1A CNV Assays ›
Gene Symbol
CHMP1A
Assay Reference Genome
Location

Chr.16:89645191 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01705098_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5119

Gene Name:

 charged multivesicular body protein 1A

Gene Aliases:

 CHMP1, PCH8, PCOLN3, PRSM1, VPS46-1, VPS46A

Location:

 Chr.16:89644431-89657785 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHMP1A NM_001083314.3 6 1643 NP_001076783.1
NM_002768.4 7 1663 NP_002759.2
NR_046418.2 7 1831
AK302055.1 6 937
BC010000.2 2 1251 AAH10000.2
D38554.1 7 1531 BAA07557.1
U58048.1 7 1720 AAC50775.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss ZNF276 CDK10 LOC105371419 SPATA2L AFG3L1P VPS9D1-AS1 TUBB3 VPS9D1 GAS8-AS1 LOC107984817 SPIRE2 SPATA33 TCF25 MC1R DPEP1 CHMP1A FANCA CENPBD1 GAS8 DBNDD1 DEF8
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss CDK10 SPATA2L TUBB3 LOC105371414 SPIRE2 PRDM7 TCF25 DPEP1 TUBB8P7 CHMP1A FANCA CENPBD1 CPNE7 SNORD68 ZNF778 RPL13 ZNF276 LOC101927817 URAHP LOC105371419 AFG3L1P VPS9D1-AS1 VPS9D1 GAS8-AS1 LOC107984817 SPATA33 MC1R ANKRD11 FAM157C LOC100287036 GAS8 DBNDD1 SPG7 DEF8
nsv573739 Chr.16:89625890 - 89696855 on Build GRCh38 Gain DPEP1 CHMP1A CDK10 SPATA2L SPATA33
nsv1063483 Chr.16:89347250 - 89661187 on Build GRCh38 Gain DPEP1 LOC101927817 ANKRD11 CHMP1A SPG7 SPATA33 CPNE7 SNORD68 RPL13
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss CDK10 LOC105371409 ACSF3 PRDM7 TCF25 TUBB8P7 CHMP1A FANCA CPNE7 SNORD68 ZNF778 RPL13 ZNF276 LOC400558 LOC101927817 MIR4722 URAHP LOC339059 VPS9D1-AS1 APRT LOC101927793 ANKRD11 FAM157C DBNDD1 CYBA DEF8 SLC22A31 SPATA2L TUBB3 LOC105371414 SPIRE2 TRAPPC2L LOC107987238 DPEP1 LOC100289580 CENPBD1 PIEZO1 PABPN1L SNAI3-AS1 GALNS LINC00304 SNAI3 LOC105371419 AFG3L1P VPS9D1 GAS8-AS1 LOC107984817 SPATA33 MC1R RNF166 CDH15 LOC100287036 GAS8 CTU2 LOC100129697 SPG7 CDT1 CBFA2T3 IL17C MVD
nsv509639 Chr.16:89513538 - 89775915 on Build GRCh38 Insertion ZNF276 CDK10 SPATA2L VPS9D1-AS1 VPS9D1 SPATA33 DPEP1 CHMP1A FANCA SPG7 CPNE7 SNORD68 RPL13
nsv1066382 Chr.16:89537178 - 89661187 on Build GRCh38 Gain DPEP1 CHMP1A SPG7 SPATA33 CPNE7 SNORD68 RPL13

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