Hs01707176_cn

• Gene Symbol: NFATC2IP
• Assay Reference Genome Location: Chr.16:28964421 on build GRCh38
• Cytoband: 16p11.2

Target Gene Details

• Entrez Gene ID: 84901
• Gene Name: nuclear factor of activated T-cells 2 interacting protein
• Gene Aliases: ESC2, NIP45, RAD60
• Location: Chr.16:28950988-28967097 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NFATC2IP	NM_032815.3	8	1833	NP_116204.3
	AF458593.1	8	1843	AAM49721.1
	AK027545.1	5	1248	BAB55189.1
	AK074761.1	8	1823	BAC11189.1
	AK094764.1	1	1733
	BC018311.1	6	1337
	BC021551.1	5	1216
	BC068007.1	5	1073	AAH68007.1
	BC080628.1	8	1500	AAH80628.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv4987n54	Chr.16:28824884 - 29032129 on Build GRCh38	Gain	ATXN2L MIR4517 NFATC2IP SPNS1 SH2B1 TUFM MIR4721 RABEP2 ATP2A1 LAT ATP2A1-AS1 CD19
esv3892826	Chr.16:28814728 - 29032129 on Build GRCh38	Gain+Loss	ATXN2L MIR4517 NFATC2IP SPNS1 SH2B1 TUFM MIR4721 RABEP2 ATP2A1 LAT ATP2A1-AS1 CD19
esv2758640	Chr.16:28163817 - 29139232 on Build GRCh38	Gain+Loss	MIR4517 NPIPB9 NPIPB6 SULT1A1 NPIPB8 SGF29 SULT1A2 CLN3 IL27 EIF3C CD19 APOBR NFATC2IP NUPR1 RRN3P2 MIR4721 ATP2A1-AS1 LOC101928215 NPIP MIR6862-1 SPNS1 TUFM RABEP2 ATP2A1 SBK1 ATXN2L MIR6862-2 EIF3CL SH2B1 LAT XPO6
nsv518648	Chr.16:28826194 - 29032129 on Build GRCh38	Loss	ATXN2L MIR4517 NFATC2IP SPNS1 SH2B1 TUFM MIR4721 RABEP2 ATP2A1 LAT ATP2A1-AS1 CD19
esv33811	Chr.16:28963694 - 28973828 on Build GRCh38	Loss	NFATC2IP
nsv1059555	Chr.16:28373144 - 29195838 on Build GRCh38	Gain	MIR4517 NPIPB9 SULT1A1 NPIPB8 SGF29 SULT1A2 CLN3 IL27 EIF3C CD19 APOBR NFATC2IP NUPR1 RRN3P2 MIR4721 ATP2A1-AS1 LOC101928215 NPIP MIR6862-1 SPNS1 TUFM RABEP2 ATP2A1 ATXN2L MIR6862-2 EIF3CL SH2B1 LAT LOC107984832
dgv2831n100	Chr.16:28812594 - 29032542 on Build GRCh38	Gain	ATXN2L MIR4517 NFATC2IP SPNS1 SH2B1 TUFM MIR4721 RABEP2 ATP2A1 LAT ATP2A1-AS1 CD19
esv3570454	Chr.16:28799004 - 29032129 on Build GRCh38	Gain	ATXN2L MIR4517 NFATC2IP SPNS1 SH2B1 TUFM MIR4721 RABEP2 ATP2A1 LAT ATP2A1-AS1 CD19
nsv457480	Chr.16:28958159 - 29032129 on Build GRCh38	Gain	MIR4517 NFATC2IP SPNS1 LAT
nsv571805	Chr.16:28824174 - 29032129 on Build GRCh38	Loss	ATXN2L MIR4517 NFATC2IP SPNS1 SH2B1 TUFM MIR4721 RABEP2 ATP2A1 LAT ATP2A1-AS1 CD19
dgv2830n100	Chr.16:28620264 - 29032542 on Build GRCh38	Gain	MIR4517 NPIPB9 SULT1A1 NPIPB8 SPNS1 TUFM RABEP2 ATP2A1 EIF3C CD19 ATXN2L MIR6862-2 NFATC2IP SH2B1 MIR4721 LAT ATP2A1-AS1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

cytokine production
protein sumoylation
positive regulation of transcription from RNA polymerase II promoter

Function(s)

protein tag