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See other OCLN CNV Assays ›
Gene Symbol
OCLN
Assay Reference Genome
Location

Chr.5:69509696 on build GRCh38
Cytoband
5q13.2
Assay ID Hs01719083_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100506658

Gene Name:

 occludin

Gene Aliases:

 BLCPMG, PPP1R115

Location:

 Chr.5:69492292-69558104 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OCLN NM_001205254.1 3 812 NP_001192183.1
NM_001205255.1 NP_001192184.1
NM_002538.3 3 1042 NP_002529.1
XM_017008913.1 3 812 XP_016864402.1
XM_017008914.1 3 787 XP_016864403.1
AB451306.1 2 606
AB451437.1 2 606
AK290697.1 3 774
AK313501.1 3 785
BC029886.1 3 784 AAH29886.1
FJ786083.1
FJ786084.1
GQ225096.1
GQ225097.1
GQ225098.1
GQ402517.1 2 650
U49184.1 3 773 AAC50451.1
U53823.1 3 1043 AAB00195.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3570182 Chr.5:69457781 - 69533508 on Build GRCh38 Loss LOC101928924 OCLN
nsv1034024 Chr.5:69464444 - 69822296 on Build GRCh38 Gain LOC728488 GTF2H2C GUSBP3 LOC101928924 OCLN
dgv5695n100 Chr.5:69508307 - 71365369 on Build GRCh38 Gain LOC728488 LOC107986352 GUSBP9 GUSBP3 LOC728526 SMA5 NAIP GTF2H2B LOC107986354 LOC647859 SERF1A LOC107986353 LOC441081 SMN2 SERF1B GTF2H2C SMN1 GTF2H2 SMA4 LOC102724392 LOC653080 LOC101929599 LOC107986351 OCLN
nsv821643 Chr.5:69272838 - 71076658 on Build GRCh38 Loss LOC728488 GUSBP3 LOC728526 SMA5 NAIP GTF2H2B LOC647859 CCDC125 SERF1A LOC101928924 SMN2 AK6 SMA4 LOC653080 CDK7 OCLN LOC107986354 LOC441081 MARVELD2 RAD17 SERF1B GTF2H2C SMN1 GTF2H2 LOC101929599 TAF9 LOC107986351
nsv1023116 Chr.5:69448480 - 69571455 on Build GRCh38 Gain GTF2H2C LOC101928924 OCLN
nsv428117 Chr.5:69347454 - 71500057 on Build GRCh38 Gain+Loss LOC728488 LOC107986352 GUSBP3 LOC728526 SMA5 NAIP GTF2H2B LOC647859 SERF1A LOC101928924 SMN2 AK6 SMA4 LOC102724392 LOC653080 OCLN GUSBP9 BDP1 PMCHL2 LOC107986354 LOC107986353 LOC441081 MARVELD2 RAD17 SERF1B GTF2H2C SMN1 GTF2H2 LOC101929599 TAF9 LOC107986351

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