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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49710788 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01731304_cn
Size
Availability Made To Order
Catalog # 4400291
Price 475.00
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 19 - Intron 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 9 1395 BAD92121.1
AF357970.1 AAL99615.1
AK074389.1 BAB85068.1
AK096516.1
AK289713.1
AK290092.1
AK309087.1 14 2241
AL831876.1 CAD38561.2
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss MIR5088 CPT1C PRR12 IRF3 BCL2L12 NOSIP ADM5 SCAF1 PRMT1 RRAS PRRG2
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss MIR5088 CPT1C PRR12 IRF3 BCL2L12 NOSIP ADM5 SCAF1 PRMT1 RRAS PRRG2
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss AKT1S1 PTOV1-AS2 NUCB1-AS1 ZNF114 TMEM143 SNORD35A CARD8 PTOV1 DBP FTL BCAT2 MIR150 RCN3 PTH2 RASIP1 PNKP SNAR-G1 SPACA4 CCDC114 ELSPBP1 TULP2 PTOV1-AS1 SNAR-A5 NTN5 SCAF1 SPHK2 BAX NTF4 MIR4324 MIR5088 FGF21 SLC6A16 LOC101059948 LIN7B PLA2G4C-AS1 PPP1R15A SNAR-A3 SNAR-A9 SNAR-C2 PLEKHA4 VRK3 KCNJ14 MIR4750 FCGRT CGB1 MIR6800 PRR12 AP2A1 FUT1 SNAR-D ADM5 CGB7 SEC1P RUVBL2 IL4I1 SULT2B1 SNAR-C3 SNAR-A14 ALDH16A1 CA11 MIR6798 SNAR-A12 PRMT1 SIGLEC16 BSPH1 NUP62 LHB LOC100287477 TBC1D17 SNAR-C1 IRF3 LOC105372430 SNAR-A2 PPFIA3 SNAR-B2 SNAR-C5 EMP3 SNAR-A10 SYNGR4 SNORD33 KCNA7 CABP5 TEAD2 SNORD35B SNAR-B1 DKKL1 CPT1C C19orf73 LIG1 SIGLEC11 BCL2L12 SNORD34 CGB5 TRPM4 MIR4749 SNAR-G2 SNAR-A11 LMTK3 NUCB1 HRC MAMSTR SNAR-A8 FLT3LG IZUMO1 CYTH2 GFY PRRG2 MIR6799 SLC17A7 PIH1D1 SNAR-A4 GRWD1 RPL18 NOSIP GRIN2D FUT2 LOC105447645 GYS1 CGB8 HSD17B14 FLJ26850 MIR4751 CCDC155 RPS11 CGB2 LOC101928295 ATF5 KDELR1 SNAR-A7 SNAR-A13 FAM83E MED25 SNRNP70 RRAS TSKS PLA2G4C ZNF473 CGB3 FUZ C19orf68 SNORD32A CARD8-AS1 CD37 SNAR-C4 DHDH SNAR-A1 SNAR-A6 RPL13A
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain MIR5088 CPT1C PRR12 IRF3 BCL2L12 ADM5 SCAF1 PRMT1 RRAS
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6799 AKT1S1 TBC1D17 PTOV1-AS2 IRF3 MIR4750 NOSIP PTOV1 MIR6800 PRR12 MIR4751 AP2A1 ADM5 ATF5 PNKP CPT1C BCL2L12 PTOV1-AS1 IL4I1 MED25 MIR4749 SCAF1 RRAS TSKS MIR5088 FUZ PRMT1 NUP62 PRRG2
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain MIR5088 CPT1C PRR12 IRF3 BCL2L12 NOSIP ADM5 SCAF1 PRMT1 RRAS PRRG2
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MIR6799 IRF3 FCGRT NOSIP SNORD35A MIR6800 MIR150 PRR12 SNORD33 RCN3 RPS11 AP2A1 ADM5 SNORD35B CPT1C BCL2L12 PTOV1-AS1 SNORD34 MED25 SCAF1 RRAS TSKS MIR5088 FUZ SNORD32A PRMT1 RPL13A PRRG2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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