Hs01732412_cn

• Gene Symbol: SYS1
• Assay Reference Genome Location: Chr.20:45367083 on build GRCh38
• Cytoband: 20q13.12

Target Gene Details

• Entrez Gene ID: 90196
• Gene Name: Sys1 golgi trafficking protein
• Gene Aliases: C20orf169, dJ453C12.4, dJ453C12.4.1
• Location: Chr.20:45361937-45376802 on Build GRCh38
• Assay Gene Location: Within Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SYS1	NM_001099791.2			NP_001093261.1
	NM_001197129.1	5	682	NP_001184058.1
	NM_033542.3	4	658	NP_291020.1
	AK075264.1	4	621	BAC11506.1
	AK172738.1
	AK309429.1	4	600
	AL591714.1	4	553	CAC39448.1
	BC048286.1	4	588	AAH48286.1
	BI820996.1	5	682

Target Gene Details

• Entrez Gene ID: 767557
• Gene Name: SYS1-DBNDD2 readthrough (NMD candidate)
• Gene Aliases: C20orf169-DBNDD2
• Location: Chr.20:45363169-45410610 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SYS1-DBNDD2	NR_003189.2
	BI199175.1
	DN994280.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1056102	Chr.20:44673341 - 45636248 on Build GRCh38	Loss	SYS1-DBNDD2 PIGT WFDC8 EPPIN-WFDC6 MATN4 STK4 KCNS1 WFDC12 SEMG2 SEMG1 PI3 WFDC10A SYS1 RBPJL EPPIN DBNDD2 WFDC9 TP53TG5 WISP2 YWHAB KCNK15-AS1 RIMS4 WFDC5 MIR6812 WFDC2 WFDC6 SDC4 TOMM34 SPINT3 KCNK15 STK4-AS1 SLPI PABPC1L

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

protein targeting to Golgi
Golgi to endosome transport
Golgi to plasma membrane protein transport