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See other JMJD8 CNV Assays ›
Gene Symbol
JMJD8
Assay Reference Genome
Location

Chr.16:684397 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01733857_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 339123

Gene Name:

 jumonji domain containing 8

Gene Aliases:

 C16orf20, PP14397

Location:

 Chr.16:681666-684446 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
JMJD8 NM_001005920.2 NP_001005920.2
NM_001323918.1 NP_001310847.1
NM_001323919.1 NP_001310848.1
NM_001323920.1 NP_001310849.1
NM_001323922.1 NP_001310851.1
NR_136650.1
NR_136651.1
NR_136652.1
BC137100.1
BC137101.1
BI463867.1
HY023676.1
HY073770.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv827480 Chr.16:672775 - 685288 on Build GRCh38 Gain LOC105371184 RHOT2 JMJD8 WDR24 STUB1 RHBDL1
nsv482182 Chr.16:681667 - 684439 on Build GRCh38 Gain JMJD8 STUB1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR3178 NPRL3 LOC105371047 PGP RNPS1 PRSS27 TPSG1 FAHD1 LOC101929280 TPSD1 SNORA10 MPG RHOT2 ABCA17P JMJD8 LINC00254 FAM173A DNASE1L2 UNKL SNORA64 MIR6859-4 MIR3677 MCRIP2 CASKIN1 PKD1 RHBDF1 MSRB1 WASIR2 MIR5587 LOC106660606 LOC100287175 SOX8 HBM MIR1225 CEMP1 LOC729652 NPW LUC7L IGFALS TPSB2 MIR940 CRAMP1 RPL3L MIR662 FAM234A MIR4717 DECR2 MRPL28 TSC2 HBA2 GNPTG PDIA2 SNHG19 NME3 LOC107984876 SSTR5-AS1 RHBDL1 E4F1 MIR3180-5 LMF1-AS1 NDUFB10 ABCA3 LOC107987233 MIR4516 WDR90 GNG13 SSTR5 ECI1 MLST8 MRPS34 RAB26 GFER CCDC154 TSR3 NOXO1 LINC00235 HN1L MIR6767 ERVK13-1 SNRNP25 HS3ST6 MEIOB NUBP2 FLJ42627 EME2 BRICD5 MSLN IFT140 HAGH LOC105371184 MIR3177 ATP6V0C NTN3 RPL23AP5 RGS11 SYNGR3 MIR6768 TMEM8A CACNA1H METTL26 AMDHD2 RNF151 LOC105371049 CCDC78 TBC1D24 BAIAP3 LOC100134368 POLR3K HBQ1 LOC105371046 RAB11FIP3 TBL3 NME4 CHTF18 MAPK8IP3 LOC105371045 C1QTNF8 NARFL AXIN1 PTX4 RPUSD1 ZNF598 TELO2 LOC652276 KCTD5 WDR24 PRR35 STUB1 DDX11L10 C16orf59 RPS2 TMEM204 MIR6511B1 RAB40C CAPN15 CCNF TRAF7 CLCN7 METRN HAGHL UBE2I SNORA78 NHLRC4 HBZ SNORD60 TPSAB1 PIGQ MIR3176 SPSB3 PRR25 LMF1 HBA1 SNHG9 PRSS29P SLC9A3R2 WFIKKN1 ARHGDIG C16orf91 NTHL1 FBXL16 LOC105371038 PDPK1
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss LINC00235 WDR24 LOC101929280 MIR662 PRR35 STUB1 MSLN LOC105371184 RHOT2 JMJD8 RAB40C CAPN15 FAM173A METRN RHBDL1 HAGHL NHLRC4 MCRIP2 LOC107987233 METTL26 PIGQ MIR3176 WDR90 GNG13 CCDC78 PRR25 MIR5587 RAB11FIP3 WFIKKN1 LOC100287175 CHTF18 NARFL FBXL16 LOC105371038 RPUSD1
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss JMJD8 WDR24 FAM173A NARFL METRN FBXL16 STUB1 HAGHL CCDC78 MSLN
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss LINC00235 WDR24 LOC101929280 MIR662 PRR35 STUB1 MSLN LOC105371184 RHOT2 JMJD8 RAB40C CAPN15 FAM173A METRN RHBDL1 HAGHL NHLRC4 MCRIP2 LOC107987233 METTL26 PIGQ MIR3176 WDR90 GNG13 CCDC78 PRR25 MIR5587 RAB11FIP3 WFIKKN1 LOC100287175 CHTF18 NARFL FBXL16 LOC105371038 RPUSD1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LINC00235 WDR24 LOC101929280 MIR662 PRR35 STUB1 MSLN LOC105371184 RHOT2 JMJD8 RAB40C CAPN15 FAM173A LOC107984876 METRN SSTR5-AS1 RHBDL1 HAGHL NHLRC4 LMF1-AS1 MCRIP2 LOC107987233 METTL26 PIGQ MIR3176 WDR90 GNG13 CCDC78 PRR25 LMF1 SSTR5 MIR5587 RAB11FIP3 WFIKKN1 LOC100287175 CHTF18 SOX8 C1QTNF8 NARFL FBXL16 LOC105371038 RPUSD1
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss WDR24 MCRIP2 METTL26 PIGQ LOC101929280 WDR90 STUB1 CCDC78 LOC105371184 RHOT2 JMJD8 RAB40C WFIKKN1 FAM173A LOC100287175 NARFL METRN FBXL16 RHBDL1 LOC105371038 HAGHL
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication WDR24 LOC101929280 MIR662 STUB1 MSLN LOC105371184 RHOT2 JMJD8 RAB40C FAM173A METRN RHBDL1 HAGHL MCRIP2 METTL26 PIGQ WDR90 GNG13 CCDC78 WFIKKN1 LOC100287175 CHTF18 NARFL FBXL16 LOC105371038 RPUSD1
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication LINC00235 WDR24 LOC101929280 MIR662 PRR35 STUB1 MSLN LOC105371184 RHOT2 JMJD8 RAB40C CAPN15 FAM173A METRN RHBDL1 HAGHL NHLRC4 MCRIP2 LOC107987233 METTL26 PIGQ MIR3176 WDR90 GNG13 CCDC78 PRR25 MIR5587 RAB11FIP3 WFIKKN1 LOC100287175 CHTF18 NARFL FBXL16 LOC105371038 RPUSD1
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss WDR24 MCRIP2 METTL26 WDR90 STUB1 CCDC78 LOC105371184 RHOT2 JMJD8 RAB40C WFIKKN1 FAM173A LOC100287175 NARFL METRN FBXL16 RHBDL1 LOC105371038 HAGHL
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain WDR24 MCRIP2 METTL26 WDR90 STUB1 CCDC78 LOC105371184 RHOT2 JMJD8 WFIKKN1 FAM173A LOC100287175 NARFL METRN FBXL16 RHBDL1 LOC105371038 HAGHL
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss WDR24 WDR90 STUB1 CCDC78 MSLN LOC105371184 RHOT2 JMJD8 FAM173A NARFL METRN FBXL16 RHBDL1 HAGHL
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss WDR24 MCRIP2 MIR662 WDR90 STUB1 GNG13 CCDC78 MSLN LOC105371184 RHOT2 JMJD8 FAM173A LOC100287175 CHTF18 NARFL METRN FBXL16 RHBDL1 LOC105371038 HAGHL RPUSD1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

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