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See other SPRN CNV Assays ›
Gene Symbol
SPRN
Assay Reference Genome
Location

Chr.10:133422620 on build GRCh38
Cytoband
10q26.3
Assay ID Hs01735901_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 503542

Gene Name:

 shadow of prion protein homolog (zebrafish)

Gene Aliases:

 SHADOO, SHO, bA108K14.1

Location:

 Chr.10:133420666-133424617 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SPRN NM_001012508.3 2 1219 NP_001012526.2
BC040198.1 2 1179
CD580523.2 1 513

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv304e212 Chr.10:133419886 - 133586746 on Build GRCh38 Gain SPRN SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
esv3579239 Chr.10:133420623 - 133563761 on Build GRCh38 Loss SPRN SCART1 SYCE1 MTG1 CYP2E1
nsv832041 Chr.10:133390168 - 133548869 on Build GRCh38 Gain SPRN PAOX SCART1 MTG1 CYP2E1
dgv1486n54 Chr.10:133389090 - 133621189 on Build GRCh38 Gain SPRN PAOX SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
nsv470981 Chr.10:133365107 - 133620799 on Build GRCh38 Gain SPRN MIR3944 PAOX ECHS1 SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
dgv39n111 Chr.10:133419150 - 133491139 on Build GRCh38 Duplication SPRN SCART1 MTG1
nsv7631 Chr.10:133388509 - 133573114 on Build GRCh38 Deletion SPRN PAOX SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
nsv1052904 Chr.10:133298340 - 133769367 on Build GRCh38 Gain SPRN TUBGCP2 ECHS1 SYCE1 SPRNP1 MTG1 FRG2B FUOM CYP2E1 MIR3944 PAOX SCART1 ZNF511 CALY PRAP1
nsv528260 Chr.10:132859348 - 133620799 on Build GRCh38 Loss TUBGCP2 ECHS1 SPRNP1 MIR202 CYP2E1 LINC01167 LINC01168 MIR3944 PAOX CFAP46 ZNF511 ADGRA1-AS1 KNDC1 ADGRA1 UTF1 SPRN SYCE1 MTG1 MIR202HG FUOM VENTX ADAM8 SCART1 CALY LINC01166 PRAP1
esv2760130 Chr.10:133416215 - 133769379 on Build GRCh38 Gain+Loss SPRN SCART1 SYCE1 SPRNP1 MTG1 FRG2B CYP2E1
dgv3e196 Chr.10:133266297 - 133450541 on Build GRCh38 Duplication ADAM8 SPRN MIR3944 PAOX TUBGCP2 ECHS1 ZNF511 MTG1 CALY FUOM PRAP1
nsv952708 Chr.10:133418497 - 133433196 on Build GRCh38 Deletion SPRN MTG1
nsv552589 Chr.10:133257500 - 133563944 on Build GRCh38 Gain SPRN TUBGCP2 ECHS1 SYCE1 MTG1 FUOM CYP2E1 ADAM8 MIR3944 PAOX SCART1 ZNF511 CALY PRAP1
dgv1489n54 Chr.10:133412162 - 133527325 on Build GRCh38 Gain SPRN SCART1 MTG1
dgv999n100 Chr.10:133392850 - 133609571 on Build GRCh38 Gain SPRN SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
dgv1001n100 Chr.10:133418490 - 133562190 on Build GRCh38 Gain SPRN SCART1 SYCE1 MTG1 CYP2E1
esv2759793 Chr.10:133030918 - 133619181 on Build GRCh38 Gain+Loss SPRN TUBGCP2 ECHS1 SYCE1 SPRNP1 MTG1 MIR202HG FUOM MIR202 CYP2E1 VENTX ADAM8 MIR3944 PAOX SCART1 ZNF511 ADGRA1-AS1 KNDC1 CALY ADGRA1 PRAP1 UTF1
nsv1052033 Chr.10:133403671 - 133456451 on Build GRCh38 Gain SPRN SCART1 MTG1
nsv514545 Chr.10:133418554 - 133563882 on Build GRCh38 Gain SPRN SCART1 SYCE1 MTG1 CYP2E1
nsv428243 Chr.10:133245214 - 133767422 on Build GRCh38 Gain SPRN TUBGCP2 ECHS1 SYCE1 SPRNP1 MTG1 MIR202HG FRG2B FUOM MIR202 CYP2E1 ADAM8 MIR3944 PAOX SCART1 ZNF511 CALY PRAP1
dgv2e196 Chr.10:133189913 - 133450541 on Build GRCh38 Duplication SPRN TUBGCP2 ECHS1 MTG1 MIR202HG FUOM MIR202 VENTX ADAM8 MIR3944 PAOX ZNF511 KNDC1 CALY PRAP1 UTF1
dgv124n27 Chr.10:133404452 - 133470611 on Build GRCh38 Gain SPRN SCART1 MTG1
dgv35e55 Chr.10:133370615 - 133621047 on Build GRCh38 Gain SPRN MIR3944 PAOX ECHS1 SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
esv33719 Chr.10:133422508 - 133574329 on Build GRCh38 Gain SPRN SCART1 SYCE1 SPRNP1 CYP2E1
dgv1487n54 Chr.10:133391295 - 133567238 on Build GRCh38 Gain SPRN PAOX SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
nsv517180 Chr.10:133402966 - 133620799 on Build GRCh38 Gain+Loss SPRN SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
esv2750853 Chr.10:133266358 - 133621047 on Build GRCh38 Gain SPRN TUBGCP2 ECHS1 SYCE1 SPRNP1 MTG1 FUOM CYP2E1 ADAM8 MIR3944 PAOX SCART1 ZNF511 CALY PRAP1
nsv1043323 Chr.10:133400840 - 133600187 on Build GRCh38 Gain SPRN SCART1 SYCE1 SPRNP1 MTG1 CYP2E1
nsv469597 Chr.10:133415366 - 133577004 on Build GRCh38 Gain SPRN SCART1 SYCE1 SPRNP1 MTG1 CYP2E1

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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