Hs01742428_cn

• Gene Symbol: FAM189B
• Assay Reference Genome Location: Chr.1:155253990 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 10712
• Gene Name: family with sequence similarity 189 member B
• Gene Aliases: C1orf2, COTE1
• Location: Chr.1:155247205-155255483 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM189B	NM_001267608.1			NP_001254537.1
	NM_006589.2			NP_006580.2
	NM_198264.1			NP_937995.1
	XM_005244845.1			XP_005244902.1
	AK093335.1
	BC006493.2			AAH06493.1
	BC007444.2			AAH07444.1
	BC008854.2			AAH08854.1
	BC010471.1			AAH10471.1
	BC017262.2			AAH17262.1
	BC040136.1			AAH40136.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	MIR555 POU5F1P4 FAM189B ASH1L RUSC1-AS1 FDPS SCAMP3 LOC105371451 RUSC1 PKLR CLK2 HCN3
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	FAM189B GBAP1 GBA KRTCAP2 MUC1 MIR92B SCAMP3 MTX1 TRIM46 THBS3
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	SCARNA4 ASH1L ARHGEF2 LOC100505728 KIAA0907 SCARNA26A SNORA80E SCARNA26B CLK2 MSTO1 MIR555 RUSC1-AS1 FDPS RXFP4 SYT11 RIT1 MSTO2P LOC105371451 ASH1L-AS1 RUSC1 PKLR YY1AP1 POU5F1P4 FAM189B DAP3 SCAMP3 HCN3 GON4L
nsv1011773	Chr.1:155219357 - 155265030 on Build GRCh38	Gain	FAM189B GBAP1 GBA SCAMP3 CLK2
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	GBAP1 ASH1L RUSC1-AS1 GBA KRTCAP2 FDPS MUC1 MIR92B DPM3 LOC105371451 RUSC1 PKLR TRIM46 SLC50A1 THBS3 FAM189B SCAMP3 MTX1 EFNA1 CLK2 HCN3

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

protein binding
WW domain binding