Hs01754552_cn

• Gene Symbol: HOXA13
• Assay Reference Genome Location: Chr.7:27198335 on build GRCh38
• Cytoband: 7p15.2

Target Gene Details

• Entrez Gene ID: 3209
• Gene Name: homeobox A13
• Gene Aliases: HOX1, HOX1J
• Location: Chr.7:27196880-27200106 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HOXA13	NM_000522.4	2	1059	NP_000513.2
	BC075791.1	2	1059	AAH75791.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv606469	Chr.7:27181212 - 27207660 on Build GRCh38	Loss	HOTTIP HOXA13 HOXA11 HOXA11-AS
dgv1094n67	Chr.7:27079675 - 27255391 on Build GRCh38	Gain	HOXA5 EVX1 HOXA2 HOTTIP HOXA-AS3 HOXA3 HOXA10 HOXA7 HOXA9 HOXA1 HOXA10-AS HOXA4 HOTAIRM1 HOXA13 HOXA6 HOXA10-HOXA9 HOXA-AS2 HOXA11 EVX1-AS HOXA11-AS MIR196B
nsv5675	Chr.7:27178983 - 27213211 on Build GRCh38	Insertion	HOTTIP HOXA13 HOXA10-HOXA9 HOXA11 HOXA11-AS HOXA10
nsv824042	Chr.7:27129612 - 27207613 on Build GRCh38	Gain	HOXA5 HOTTIP HOXA-AS3 HOXA3 HOXA10 HOXA7 HOXA9 HOXA10-AS HOXA4 HOXA13 HOXA6 HOXA10-HOXA9 HOXA11 HOXA11-AS MIR196B
nsv606468	Chr.7:27162670 - 27241685 on Build GRCh38	Loss	HOTTIP HOXA10-AS HOXA13 HOXA10-HOXA9 HOXA11 EVX1-AS HOXA11-AS HOXA10 MIR196B HOXA9

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

skeletal system development
transcription, DNA-templated
regulation of transcription, DNA-templated

Function(s)

DNA binding
sequence-specific DNA binding