Hs01791063_cn

• Gene Symbol: LITAF
• Assay Reference Genome Location: Chr.16:11548160 on build GRCh38
• Cytoband: 16p13.13

Target Gene Details

• Entrez Gene ID: 9516
• Gene Name: lipopolysaccharide induced TNF factor
• Gene Aliases: PIG7, SIMPLE, TP53I7
• Location: Chr.16:11547722-11636377 on Build GRCh38
• Assay Gene Location: Within Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LITAF	NM_001136472.1	4	2033	NP_001129944.1
	NM_001136473.1	5	2131	NP_001129945.1
	NM_004862.3	4	2196	NP_004853.2
	NR_024320.1	4	2097
	XM_006720982.2	4	2107	XP_006721045.1
	XM_006720983.3	4	2397	XP_006721046.1
	XM_006720984.3	4	2149	XP_006721047.1
	XM_006720985.3	4	2111	XP_006721048.1
	XM_011522754.2	6	2510	XP_011521056.1
	XM_017023896.1	4	2056	XP_016879385.1
	AB034747.1	4	2196	BAB32547.1
	AK095955.1	5	2131
	BX537543.1	4	2098	CAD97778.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv2729n100	Chr.16:11483511 - 11548386 on Build GRCh38	Gain	LITAF LOC400499
nsv524676	Chr.16:11475598 - 11701723 on Build GRCh38	Loss	TXNDC11 LITAF LOC400499 SNN
nsv457409	Chr.16:11449038 - 11728210 on Build GRCh38	Gain	TXNDC11 LOC101927131 LITAF LOC400499 SNN
nsv1160341	Chr.16:11519313 - 11553636 on Build GRCh38	Deletion	LITAF LOC400499
esv3582010	Chr.16:11543708 - 11554324 on Build GRCh38	Loss	LITAF

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Process(es)

regulation of cytokine production
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
apoptotic process
signal transduction
aging
negative regulation of NF-kappaB import into nucleus
positive regulation of I-kappaB kinase/NF-kappaB signaling
cellular response to lipopolysaccharide

Function(s)

signal transducer activity
protein binding
WW domain binding