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See other TSPEAR CNV Assays ›
Gene Symbol
TSPEAR
Assay Reference Genome
Location

Chr.21:44499622 on build GRCh38
Cytoband
21q22.3
Assay ID Hs01792272_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54084

Gene Name:

 thrombospondin type laminin G domain and EAR repeats

Gene Aliases:

 C21orf29, DFNB98, TSP-EAR

Location:

 Chr.21:44497892-44711580 on Build GRCh38

Assay Gene Location:

 Within Exon 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSPEAR NM_001272037.1 13 2299 NP_001258966.1
NM_144991.2 12 2237 NP_659428.2
AJ487962.1 12 2237 CAD32309.1
BC115415.1 10 1763

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834109 Chr.21:44449469 - 44510164 on Build GRCh38 Loss LRRC3-AS1 TSPEAR-AS1 LOC100505727 LRRC3 TSPEAR
nsv953646 Chr.21:44279118 - 44523117 on Build GRCh38 Deletion TSPEAR-AS2 AIRE LRRC3-AS1 TSPEAR-AS1 LOC100505727 TRPM2-AS LRRC3 TSPEAR TRPM2 PFKL C21orf2
nsv1058359 Chr.21:44304172 - 44547662 on Build GRCh38 Gain TSPEAR-AS2 LRRC3-AS1 TSPEAR-AS1 LOC100505727 TRPM2-AS LRRC3 TSPEAR TRPM2 KRTAP10-1 PFKL C21orf2
nsv587802 Chr.21:44485022 - 44508296 on Build GRCh38 Loss TSPEAR-AS1 LOC100505727 TSPEAR
esv2723638 Chr.21:44249174 - 44593709 on Build GRCh38 Deletion KRTAP10-6 DNMT3L KRTAP10-2 AIRE KRTAP10-3 TSPEAR-AS1 LOC100505727 LRRC3 TSPEAR KRTAP10-1 C21orf2 TSPEAR-AS2 KRTAP10-5 LRRC3-AS1 KRTAP10-4 TRPM2-AS LOC105372833 TRPM2 PFKL
nsv1055163 Chr.21:44475780 - 44646211 on Build GRCh38 Gain KRTAP10-6 KRTAP10-2 KRTAP10-3 TSPEAR-AS1 LOC100505727 TSPEAR KRTAP10-8 KRTAP10-1 KRTAP10-10 TSPEAR-AS2 KRTAP10-5 KRTAP10-7 KRTAP10-4 KRTAP10-9
esv33817 Chr.21:43749531 - 44647625 on Build GRCh38 Loss DNMT3L KRTAP10-8 KRTAP10-1 KRTAP10-10 TSPEAR-AS2 CSTB KRTAP10-5 LRRC3-AS1 KRTAP10-7 AATBC TRPM2 TRAPPC10 KRTAP10-6 PWP2 KRTAP10-2 AIRE KRTAP10-3 TSPEAR-AS1 LOC100505727 AGPAT3 C21orf33 LRRC3 TSPEAR C21orf2 KRTAP10-11 ICOSLG KRTAP10-4 PDXK TRPM2-AS LOC105372833 KRTAP10-9 RRP1 PFKL

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

intercellular signal molecule

Gene Ontology Categories:

Function(s) Process(es)


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