accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other GPANK1 CNV Assays ›
Gene Symbol
GPANK1
Assay Reference Genome
Location

Chr.6:31662141 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01806702_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 7918

Gene Name:

 G-patch domain and ankyrin repeats 1

Gene Aliases:

 ANKRD59, BAT4, D6S54E, G5, GPATCH10

Location:

 Chr.6:31661229-31666283 on Build GRCh38

Assay Gene Location:

 Within Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GPANK1 NM_001199237.1 4 1881 NP_001186166.1
NM_001199238.1 4 1750 NP_001186167.1
NM_001199239.1 4 1747 NP_001186168.1
NM_001199240.1 4 1533 NP_001186169.1
NM_033177.3 3 1857 NP_149417.1
XM_005249403.3 4 1884 XP_005249460.1
XM_006715204.1 4 1562 XP_006715267.1
XM_011514909.1 4 1602 XP_011513211.1
XM_011514910.1 4 1599 XP_011513212.1
AJ420471.1 3 1449
AK123707.1 4 1881
BC008783.1 3 1847 AAH08783.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv462871 Chr.6:31607499 - 31664357 on Build GRCh38 Loss MIR6832 APOM GPANK1 SNORA38 AIF1 PRRC2A BAG6 C6orf47
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion RNF5 PRRT1 APOM NELFE MICB AGER TNXA HSPA1B C4B SKIV2L ABHD16A LY6G6E LTA SAPCD1 VARS AGPAT1 DDAH2 PPT2 HLA-DRA C2-AS1 SNORD52 CYP21A2 FKBPL GPANK1 HSPA1A EGFL8 DDX39B NCR3 HCG23 ZBTB12 BTNL2 LOC102725068 LY6G5B NEU1 MSH5 GPSM3 STK19 CLIC1 HCG26 PRRC2A LOC100287329 SNORD48 LOC101929163 LSM2 LST1 HLA-DRB6 BAG6 MIR1236 DDX39B-AS1 PPT2-EGFL8 SNORA38 AIF1 NOTCH4 ATP6V1G2-DDX39B HCP5 SNORD84 SLC44A4 HSPA1L DXO MSH5-SAPCD1 C6orf47 MCCD1 LTB MIR6833 MIR4646 ATP6V1G2 MIR6721 LY6G6F HLA-DRB1 C6orf25 ATF6B PBX2 CYP21A1P MIR6832 NFKBIL1 HLA-DRB5 CSNK2B SAPCD1-AS1 C4A LY6G5C EHMT2 SNORD117 LY6G6D VWA7 TNXB CFB C2 C6orf48 C6orf10 TNF LY6G6C LOC100507547
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion RNF5 PRRT1 APOM NELFE VPS52 TNXA C4B LOC100294145 ABHD16A SAPCD1 VARS AGPAT1 HLA-DRA CYP21A2 FKBPL HCG25 ZBTB9 MIR6873 DDX39B NCR3 HCG23 ZBTB12 RXRB BTNL2 LY6G5B MSH5 HLA-DPB2 PSMB8-AS1 HCG26 MIR5004 PRRC2A HLA-DOA LSM2 HLA-DRB6 BAG6 MIR1236 HLA-DQB2 PPT2-EGFL8 HLA-DPB1 ATP6V1G2-DDX39B SNORD84 DXO MSH5-SAPCD1 C6orf47 MCCD1 SLC39A7 LTB MIR6833 PSMB9 WDR46 TAPBP PPP1R2P1 HLA-DQB1 LY6G6F HLA-DRB1 C6orf25 ATF6B PBX2 CYP21A1P MIR6832 CSNK2B SAPCD1-AS1 C4A VWA7 RGL2 C2 ZBTB22 TNF LY6G6C PHF1 PSMB8 MICB AGER HSPA1B PFDN6 MIR219A1 RPS18 SKIV2L LY6G6E LTA HLA-DQA1 DDAH2 PPT2 B3GALT4 C2-AS1 SNORD52 TAP2 GPANK1 HCG24 HSPA1A EGFL8 HLA-DQA2 LOC102725068 NEU1 HLA-DQB1-AS1 GPSM3 STK19 HSD17B8 HLA-DPA1 CLIC1 LOC100287329 SNORD48 LOC101929163 LST1 DDX39B-AS1 SNORA38 CUTA AIF1 NOTCH4 MIR3135B HCP5 TAP1 SLC44A4 HSPA1L MIR6834 MIR4646 BRD2 COL11A2 ATP6V1G2 MIR6721 KIFC1 NFKBIL1 HLA-DOB HLA-DRB5 LY6G5C EHMT2 DAXX HLA-DMA SNORD117 LY6G6D TNXB CFB C6orf48 C6orf10 SYNGAP1 RING1 LOC100507547 HLA-DMB
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss APOM NELFE MICB TNXA HSPA1B C4B SKIV2L ABHD16A LY6G6E LTA SAPCD1 VARS DDAH2 C2-AS1 SNORD52 CYP21A2 GPANK1 HSPA1A DDX39B NCR3 ZBTB12 LOC102725068 LY6G5B NEU1 MSH5 STK19 CLIC1 HCG26 PRRC2A LOC100287329 SNORD48 HLA-B LSM2 LST1 BAG6 MIR1236 DDX39B-AS1 SNORA38 AIF1 ATP6V1G2-DDX39B HCP5 SNORD84 SLC44A4 HSPA1L DXO MSH5-SAPCD1 C6orf47 MCCD1 LTB MICA MIR4646 ATP6V1G2 LY6G6F C6orf25 CYP21A1P MIR6832 NFKBIL1 CSNK2B SAPCD1-AS1 C4A LY6G5C EHMT2 SNORD117 LY6G6D VWA7 TNXB CFB C2 C6orf48 TNF MIR6891 LY6G6C
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion RNF5 PRRT1 APOM NELFE VPS52 TNXA C4B LOC100294145 ABHD16A SAPCD1 VARS AGPAT1 HLA-DRA CYP21A2 FKBPL HCG25 ZBTB9 MIR6873 DDX39B NCR3 HCG23 ZBTB12 RXRB BTNL2 LY6G5B MSH5 HLA-DPB2 PSMB8-AS1 HCG26 MIR5004 PRRC2A HLA-DOA LSM2 HLA-DRB6 BAG6 MIR1236 HLA-DQB2 PPT2-EGFL8 HLA-DPB1 ATP6V1G2-DDX39B SNORD84 DXO MSH5-SAPCD1 C6orf47 MCCD1 SLC39A7 LTB MIR6833 PSMB9 WDR46 TAPBP PPP1R2P1 HLA-DQB1 LY6G6F HLA-DRB1 C6orf25 ATF6B PBX2 CYP21A1P MIR6832 CSNK2B SAPCD1-AS1 C4A VWA7 RGL2 C2 ZBTB22 TNF LY6G6C PHF1 PSMB8 MICB AGER HSPA1B PFDN6 MIR219A1 RPS18 SKIV2L LY6G6E LTA HLA-DQA1 DDAH2 PPT2 B3GALT4 C2-AS1 SNORD52 TAP2 GPANK1 HCG24 HSPA1A EGFL8 HLA-DQA2 LOC102725068 NEU1 HLA-DQB1-AS1 GPSM3 STK19 HSD17B8 HLA-DPA1 CLIC1 LOC100287329 SNORD48 LOC101929163 LST1 DDX39B-AS1 SNORA38 CUTA AIF1 NOTCH4 MIR3135B HCP5 TAP1 SLC44A4 HSPA1L MIR6834 MIR4646 BRD2 COL11A2 ATP6V1G2 MIR6721 KIFC1 NFKBIL1 HLA-DOB HLA-DRB5 LY6G5C EHMT2 DAXX HLA-DMA SNORD117 LY6G6D TNXB CFB C6orf48 C6orf10 SYNGAP1 RING1 LOC100507547 HLA-DMB
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss RNF5 PRRT1 APOM NELFE MICB AGER TNXA HSPA1B C4B SKIV2L ABHD16A LY6G6E LTA SAPCD1 VARS AGPAT1 DDAH2 PPT2 HLA-DRA C2-AS1 SNORD52 CYP21A2 FKBPL GPANK1 HSPA1A EGFL8 DDX39B NCR3 HCG23 ZBTB12 BTNL2 LOC102725068 LY6G5B NEU1 MSH5 GPSM3 STK19 CLIC1 HCG26 PRRC2A LOC100287329 SNORD48 LOC101929163 HLA-B LSM2 LST1 BAG6 MIR1236 DDX39B-AS1 PPT2-EGFL8 SNORA38 AIF1 NOTCH4 ATP6V1G2-DDX39B HCP5 SNORD84 SLC44A4 HSPA1L DXO MSH5-SAPCD1 C6orf47 MCCD1 LTB MIR6833 MICA MIR4646 ATP6V1G2 MIR6721 LY6G6F C6orf25 ATF6B PBX2 CYP21A1P MIR6832 NFKBIL1 CSNK2B SAPCD1-AS1 C4A LY6G5C EHMT2 SNORD117 LY6G6D VWA7 TNXB CFB C2 C6orf48 C6orf10 TNF MIR6891 LY6G6C LOC100507547
nsv1161370 Chr.6:31600692 - 31714252 on Build GRCh38 Deletion MIR6832 APOM GPANK1 SNORA38 CSNK2B AIF1 LY6G5C LY6G5B C6orf47 MIR4646 ABHD16A PRRC2A LY6G6E BAG6 LY6G6F
nsv830627 Chr.6:31528437 - 31692173 on Build GRCh38 Loss DDX39B-AS1 APOM SNORA38 AIF1 ATP6V1G2-DDX39B SNORD84 C6orf47 MCCD1 LTB ABHD16A LTA ATP6V1G2 MIR6832 GPANK1 NFKBIL1 CSNK2B LY6G5C DDX39B NCR3 SNORD117 LY6G5B TNF PRRC2A LOC100287329 LST1 BAG6

Back To Top

More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Process(es)


Back To Top

Related Products