Hs01816974_cn

• Gene Symbol: TRIM46
• Assay Reference Genome Location: Chr.1:155178077 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 80128
• Gene Name: tripartite motif containing 46
• Gene Aliases: GENEY, TRIFIC
• Location: Chr.1:155173714-155184971 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRIM46	NM_001256599.1	6	1175	NP_001243528.1
	NM_001256600.1			NP_001243529.1
	NM_001256601.1	6	1006	NP_001243530.1
	NM_001282378.1	5	903	NP_001269307.1
	NM_001282379.1	6	1165	NP_001269308.1
	NM_025058.4	6	1165	NP_079334.3
	NR_046327.1	6	1165
	NR_046329.1	7	1224
	NR_104150.1	6	1165
	XM_011510002.1	7	1108	XP_011508304.1
	XM_017002393.1	7	1279	XP_016857882.1
	AK026882.1	6	1076	BAB15580.1
	AK096158.1	6	1053
	AK128139.1	7	1224	BAC87293.1
	AK225075.1	6	1076
	AK296300.1
	AK297318.1	5	811
	AK304542.1	6	1009
	AK308075.1	6	970
	AK309699.1	6	1006
	AK310429.1	7	1311
	AY251386.1	6	985	AAP51206.1
	BC069416.1	6	1061	AAH69416.1
	BC069568.1	6	1061	AAH69568.1
	BC126372.1	6	1082
	BX283909.1	3	271

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527682	Chr.1:155177242 - 155227671 on Build GRCh38	Gain	GBAP1 TRIM46 THBS3 MUC1 MIR92B MTX1
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	GBAP1 TRIM46 THBS3 MUC1 GBA MIR92B KRTCAP2 SCAMP3 MTX1 FAM189B
nsv8447	Chr.1:155172153 - 155184461 on Build GRCh38	Gain	TRIM46 KRTCAP2
nsv1010146	Chr.1:155146620 - 155231273 on Build GRCh38	Gain	GBAP1 TRIM46 THBS3 MUC1 MIR92B KRTCAP2 MTX1
nsv547961	Chr.1:155109822 - 155225189 on Build GRCh38	Loss	GBAP1 TRIM46 DPM3 THBS3 MUC1 EFNA1 SLC50A1 MIR92B KRTCAP2 MTX1
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	RUSC1 GBAP1 TRIM46 DPM3 THBS3 MUC1 EFNA1 RUSC1-AS1 SLC50A1 MIR92B PKLR SCAMP3 LOC105371451 MTX1 HCN3 ASH1L FDPS GBA KRTCAP2 FAM189B CLK2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s)

zinc ion binding