Genomic Map
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Target Gene Details
Entrez Gene ID: | 1138 |
Gene Name: | cholinergic receptor nicotinic alpha 5 subunit |
Gene Aliases: |
LNCR2 |
Location: |
Chr.15:78565520-78595269 on Build GRCh38 |
Assay Gene Location: | Within Exon 5 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CHRNA5 | NM_000745.3 | 5 | 1292 | NP_000736.2 |
| NM_001307945.1 | NP_001294874.1 | |||
| XM_005254142.3 | XP_005254199.1 | |||
| XM_017021881.1 | XP_016877370.1 | |||
| AF385586.1 | 5 | 1238 | ||
| BC033639.1 | 5 | 1254 | AAH33639.1 | |
| BX332469.2 | ||||
| M83712.1 | 5 | 1240 | AAA58357.1 | |
| U62434.1 | 5 | 1246 | AAB40112.1 | |
| Y08419.1 | 5 | 1092 | CAA69696.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv518840 | Chr.15:78578946 - 78594829 on Build GRCh38 | Loss |
 CHRNA5
CHRNA3
|
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Additional Information:
For this assay, SNP(s) [rs79109919] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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