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See other C17ORF107 CNV Assays ›
Gene Symbol
C17orf107
Assay Reference Genome
Location

Chr.17:4902217 on build GRCh38
Cytoband
17p13.2
Assay ID Hs01825980_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100130311

Gene Name:

 chromosome 17 open reading frame 107

Gene Aliases:

 -

Location:

 Chr.17:4899653-4902932 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C17orf107 NM_001145536.1 3 2367 NP_001139008.1
AK128415.1 3 2367 BAC87429.1

Target Gene Details

Entrez Gene ID:

 1145

Gene Name:

 cholinergic receptor nicotinic epsilon subunit

Gene Aliases:

 ACHRE, CMS1D, CMS1E, CMS2A, CMS4A, CMS4B, CMS4C, FCCMS, SCCMS

Location:

 Chr.17:4897769-4905019 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHRNE NM_000080.3 NP_000071.1
XM_017024115.1 XP_016879604.1
X66403.1 CAA47030.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833350 Chr.17:4884713 - 5060776 on Build GRCh38 Loss MIR6864 RNF167 GP1BA CAMTA2 KIF1C CHRNE INCA1 PFN1 ENO3 MINK1 MIR6865 LOC102724009 SLC52A1 LOC101927979 SLC25A11 C17orf107 SPAG7
esv3572365 Chr.17:4874864 - 4942141 on Build GRCh38 Gain MINK1 RNF167 GP1BA CHRNE SLC25A11 C17orf107
nsv833349 Chr.17:4853631 - 4991300 on Build GRCh38 Loss MIR6864 RNF167 GP1BA CAMTA2 CHRNE INCA1 PFN1 ENO3 MINK1 MIR6865 LOC101927979 SLC25A11 C17orf107 SPAG7
nsv574275 Chr.17:4875192 - 4946479 on Build GRCh38 Gain MINK1 RNF167 GP1BA CHRNE PFN1 SLC25A11 C17orf107
nsv833347 Chr.17:4785297 - 4955981 on Build GRCh38 Loss RNF167 GP1BA VMO1 LOC107984973 CHRNE PLD2 GLTPD2 PFN1 ENO3 MINK1 SLC25A11 C17orf107 PSMB6
dgv3088n100 Chr.17:4868317 - 4942562 on Build GRCh38 Gain MINK1 RNF167 GP1BA CHRNE SLC25A11 C17orf107
nsv509647 Chr.17:4865132 - 4918672 on Build GRCh38 Insertion MINK1 CHRNE C17orf107
nsv574273 Chr.17:4585589 - 5460332 on Build GRCh38 Gain MIR6864 RPAIN VMO1 CAMTA2 LOC107984973 LOC101928000 SCIMP PLD2 INCA1 PFN1 C1QBP MINK1 LOC400568 LOC102724009 SMTNL2 LOC101559451 RABEP1 LOC101927979 CXCL16 LOC100130950 PELP1 USP6 SLC25A11 C17orf107 ZNF232 SPAG7 PSMB6 RNF167 NUP88 GP1BA KIF1C CHRNE GLTPD2 DHX33 ARRB2 ZMYND15 ENO3 MED11 MIR6865 SLC52A1 ZFP3 TM4SF5 ALOX15 ZNF594

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