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See other PCYT1A CNV Assays ›
Gene Symbol
PCYT1A
Assay Reference Genome
Location

Chr.3:196247523 on build GRCh38
Cytoband
3q29
Assay ID Hs01827216_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 5130

Gene Name:

 phosphate cytidylyltransferase 1, choline, alpha

Gene Aliases:

 CCTA, CT, CTA, CTPCT, PCYT1, SMDCRD

Location:

 Chr.3:196237745-196287752 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PCYT1A NM_001312673.1 NP_001299602.1
NM_005017.3 NP_005008.2
AK304534.1
AK309073.1 4 1166
AK309300.1 4 1171
AK313450.1
BC046355.1 AAH46355.1
L28957.1 AAA72127.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3341217 Chr.3:196246884 - 196248082 on Build GRCh38 Duplication PCYT1A
esv3599278 Chr.3:196229547 - 196249176 on Build GRCh38 Gain SLC51A PCYT1A
nsv997797 Chr.3:195931489 - 196486087 on Build GRCh38 Gain LINC00885 TM4SF19-AS1 RNF168 TCTEX1D2 ZDHHC19 TM4SF19 PCYT1A TFRC SDHAP1 UBXN7 SLC51A UBXN7-AS1 LOC105374301 TM4SF19-TCTEX1D2
esv3599276 Chr.3:196227560 - 196295937 on Build GRCh38 Loss SLC51A TCTEX1D2 PCYT1A
nsv1009811 Chr.3:196124925 - 196411200 on Build GRCh38 Gain LINC00885 UBXN7 TM4SF19-AS1 SLC51A TM4SF19-TCTEX1D2 TCTEX1D2 ZDHHC19 TM4SF19 PCYT1A
nsv593071 Chr.3:196132016 - 196345571 on Build GRCh38 Gain LINC00885 TM4SF19-AS1 SLC51A TM4SF19-TCTEX1D2 TCTEX1D2 ZDHHC19 TM4SF19 PCYT1A
nsv1008512 Chr.3:195982791 - 196248065 on Build GRCh38 Gain LINC00885 SDHAP1 SLC51A LOC105374301 ZDHHC19 PCYT1A TFRC
esv2759213 Chr.3:195382058 - 196344722 on Build GRCh38 Gain+Loss LINC00885 LOC105374299 LOC105374297 TM4SF19-AS1 TNK2 MUC4 SDHAP2 ACAP2 MUC20 LINC00969 TCTEX1D2 APOD LOC101929697 ZDHHC19 TM4SF19 PPP1R2 PCYT1A TFRC MIR6829 SDHAP1 SLC51A LOC105374301 TM4SF19-TCTEX1D2 MIR570

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