Hs01835512_cn

• Gene Symbol: TRPM1
• Assay Reference Genome Location: Chr.15:31001538 on build GRCh38
• Cytoband: 15q13.3

Target Gene Details

• Entrez Gene ID: 4308
• Gene Name: transient receptor potential cation channel subfamily M member 1
• Gene Aliases: CSNB1C, LTRPC1, MLSN1
• Location: Chr.15:31001061-31161273 on Build GRCh38
• Assay Gene Location: Within Exon 29

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRPM1	NM_001252020.1	27	5527	NP_001238949.1
	NM_001252024.1	28	5315	NP_001238953.1
	NM_002420.5	27	5229	NP_002411.3
	AF071787.1	27	5206	AAC80000.1
	BM695497.1
	BU743036.1	1	496
	HM135790.1	28	5310
	HM135791.1	27	5527
	N42519.1	1	236

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv832951	Chr.15:30839036 - 31012266 on Build GRCh38	Loss	MTMR10 FAN1 TRPM1
nsv525795	Chr.15:30644082 - 31032328 on Build GRCh38	Gain	MTMR10 LOC107984025 FAN1 LOC100288637 HERC2P10 LOC101930434 TRPM1
esv33507	Chr.15:30891121 - 31178820 on Build GRCh38	Loss	MTMR10 FAN1 MIR211 TRPM1
nsv1046874	Chr.15:30715930 - 31002451 on Build GRCh38	Gain	MTMR10 LOC107984025 FAN1 LOC100288637 HERC2P10 LOC101930434 TRPM1
esv3636036	Chr.15:30818302 - 31038636 on Build GRCh38	Gain	MTMR10 FAN1 HERC2P10 TRPM1
nsv832952	Chr.15:30912223 - 31041795 on Build GRCh38	Gain+Loss	MTMR10 FAN1 TRPM1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

ion channel, transporter

Gene Ontology Categories:

Process(es)

transport
G-protein coupled glutamate receptor signaling pathway
visual perception
retinal rod cell development
protein tetramerization
calcium ion transport into cytosol
calcium ion transmembrane transport
cellular response to light stimulus

Function(s)

calcium channel activity