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See other NPDC1 CNV Assays ›
Gene Symbol
NPDC1
Assay Reference Genome
Location

Chr.9:137040033 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01843596_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 56654

Gene Name:

 neural proliferation, differentiation and control 1

Gene Aliases:

 CAB, CAB-, CAB-1, CAB1, NPDC-1

Location:

 Chr.9:137039457-137046224 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NPDC1 NM_015392.3 NP_056207.3
AF272357.1 AAF76225.1
AF283247.1 AAF82603.1
AF285836.1 AAK27328.1
AF327349.1 AAL56010.1
AK054950.1
AK074793.1 BAC11212.1
AK225091.1
AL050221.1 CAB43321.1
BC004217.2 AAH04217.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss LOC101930307 C9orf142 MAN1B1 PTGDS TMEM210 PRR31 C9orf139 GRIN1 SAPCD2 MAN1B1-AS1 DPP7 LRRC26 NPDC1 CLIC3 LCNL1 UAP1L1 FUT7 MIR3621 ENTPD2 ABCA2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss LOC101930307 NDOR1 C9orf142 PTGDS PRR31 TOR4A FAM166A C8G MAMDC4 NRARP MIR4292 PNPLA7 LCN12 MIR3621 NOXA1 ABCA2 MIR4479 MAN1B1 TMEM210 SAPCD2 DPP7 CYSRT1 RNF208 ENTPD2 MIR7114 TPRN C9orf173-AS1 EXD3 FBXW5 TUBB4B GRIN1 TRAF2 EDF1 MAN1B1-AS1 LRRC26 RNF224 STPG3 UAP1L1 SSNA1 RABL6 ENTPD8 SLC34A3 PHPT1 CCDC183-AS1 CCDC183 TMEM203 C9orf139 ANAPC2 NSMF NPDC1 NELFB CLIC3 LCNL1 FUT7 C9orf172
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion LOC101930307 C9orf142 MAN1B1 PTGDS PRR31 C8G C9orf139 SAPCD2 MAN1B1-AS1 DPP7 NPDC1 CLIC3 LCNL1 UAP1L1 LCN12 FUT7 ENTPD2 ABCA2
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss LOC101930307 MIR126 C9orf142 PTGDS PRR31 C8G FAM69B AGPAT2 EGFL7 MAMDC4 LCN10 LCN8 MIR4292 LCN12 MIR3621 ABCA2 SDCCAG3 SEC16A MIR4479 MAN1B1 SNAPC4 TMEM210 MIR6722 HSPC324 SAPCD2 DPP7 MIR4674 SNORA17A ENTPD2 NOTCH1 LOC100128593 PMPCA FBXW5 NALT1 GRIN1 TRAF2 EDF1 MAN1B1-AS1 SNHG7 LRRC26 LCN6 UAP1L1 INPP5E RABL6 SNORA17B CARD9 MIR4673 LCN15 TMEM141 PHPT1 CCDC183-AS1 CCDC183 C9orf139 NPDC1 CLIC3 LCNL1 FUT7 C9orf163 C9orf172 DNLZ LINC01451
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss LOC101930307 MAN1B1 TMEM210 C9orf139 GRIN1 SAPCD2 MAN1B1-AS1 DPP7 LRRC26 NPDC1 UAP1L1 MIR3621 ENTPD2
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain LOC101930307 MAN1B1 TMEM210 C9orf139 GRIN1 SAPCD2 MAN1B1-AS1 DPP7 ANAPC2 LRRC26 NPDC1 UAP1L1 SSNA1 FUT7 MIR3621 ENTPD2
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss NPDC1 FUT7 ENTPD2 C9orf139 ABCA2
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion LOC101930307 NDOR1 MIR126 C9orf142 PTGDS PRR31 TOR4A FAM166A C8G FAM69B AGPAT2 EGFL7 MAMDC4 NRARP LCN10 LCN8 MIR4292 LCN12 MIR3621 ABCA2 MIR4479 MAN1B1 TMEM210 MIR6722 HSPC324 SAPCD2 DPP7 CYSRT1 RNF208 SNORA17A ENTPD2 TPRN C9orf173-AS1 LOC100128593 EXD3 FBXW5 TUBB4B GRIN1 TRAF2 EDF1 MAN1B1-AS1 SNHG7 LRRC26 LCN6 RNF224 STPG3 UAP1L1 SSNA1 RABL6 SNORA17B LCN15 TMEM141 SLC34A3 PHPT1 CCDC183-AS1 CCDC183 TMEM203 C9orf139 ANAPC2 NPDC1 NELFB CLIC3 LCNL1 FUT7 C9orf172 LINC01451

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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