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See other TSR3 CNV Assays ›
Gene Symbol
TSR3
Assay Reference Genome
Location

Chr.16:1350206 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01844120_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115939

Gene Name:

 TSR3, acp transferase ribosome maturation factor

Gene Aliases:

 C16orf42

Location:

 Chr.16:1349240-1351872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSR3 NM_001001410.2 NP_001001410.1
BC013943.1 AAH13943.1
BC016699.1 AAH16699.1
BC017325.2 AAH17325.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain CCDC154 LOC105371045 TSR3 PTX4 GNPTG C16orf91 TELO2 UNKL BAIAP3 UBE2I IFT140 CLCN7
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RNPS1 LMF1 FAM173A PGP MSLN TPSB2 NME3 SYNGR3 WFIKKN1 LOC101929280 PDIA2 RPS2 NPRL3 ATP6V0C CLCN7 DDX11L10 CCDC154 PRR35 SNHG9 MIR3176 LOC100287175 LOC729652 HAGHL LOC106660606 LOC105371184 MIR662 CRAMP1 IGFALS HBZ LOC105371045 MCRIP2 HBA2 MLST8 BAIAP3 MIR3677 ABCA3 MPG MIR6511B1 SNORA78 CACNA1H CCNF ECI1 MSRB1 NTN3 ERVK13-1 STUB1 LINC00235 LOC107984876 HN1L FAM234A TMEM8A PRSS29P SPSB3 RPL3L RHBDF1 FLJ42627 JMJD8 AXIN1 SNORD60 CASKIN1 LUC7L MRPS34 WASIR2 TPSG1 SOX8 SNORA64 SLC9A3R2 E4F1 CHTF18 LOC100134368 MIR3178 WDR90 TMEM204 NME4 UNKL CAPN15 LOC105371046 POLR3K SNRNP25 MIR5587 RGS11 NHLRC4 SNHG19 C1QTNF8 MAPK8IP3 PKD1 CCDC78 HBA1 NDUFB10 LOC105371038 EME2 CEMP1 PRR25 NOXO1 RPL23AP5 MIR6767 RAB26 KCTD5 MIR6768 TRAF7 NUBP2 SNORA10 TPSD1 SSTR5 TELO2 TPSAB1 MIR6859-4 ABCA17P METRN LINC00254 MEIOB MIR4516 GFER MIR1225 TSR3 PIGQ DECR2 MRPL28 LOC105371049 LMF1-AS1 NARFL RHBDL1 LOC105371047 METTL26 RHOT2 HBQ1 SSTR5-AS1 HS3ST6 LOC107987233 PDPK1 RNF151 BRICD5 HAGH RPUSD1 PTX4 GNPTG C16orf91 MIR3177 TBC1D24 UBE2I IFT140 ZNF598 MIR4717 C16orf59 FBXL16 RAB11FIP3 HBM DNASE1L2 MIR940 AMDHD2 WDR24 NPW NTHL1 LOC652276 GNG13 RAB40C ARHGDIG MIR3180-5 FAHD1 TSC2 TBL3 PRSS27
nsv974746 Chr.16:1328043 - 1351866 on Build GRCh38 Duplication TSR3 BAIAP3
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss CCDC154 TPSG1 TPSD1 SSTR5-AS1 C1QTNF8 SOX8 SSTR5 TPSAB1 LOC107984876 LMF1 PRSS29P TPSB2 LOC105371045 TSR3 GNPTG C16orf91 LMF1-AS1 UNKL BAIAP3 UBE2I CACNA1H CLCN7
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain TPSG1 TPSD1 SSTR5-AS1 C1QTNF8 SSTR5 TPSAB1 PRSS29P TPSB2 TSR3 GNPTG UNKL BAIAP3 UBE2I CACNA1H
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss TPSG1 TPSD1 SSTR5-AS1 C1QTNF8 SOX8 SSTR5 TPSAB1 LMF1 PRSS29P TPSB2 TSR3 GNPTG LMF1-AS1 UNKL BAIAP3 UBE2I CACNA1H
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion CCDC154 TPSG1 TPSD1 TELO2 TPSAB1 PRSS29P TPSB2 LOC105371045 TSR3 PTX4 GNPTG TMEM204 C16orf91 UNKL BAIAP3 UBE2I CACNA1H IFT140 LOC105371047 CLCN7
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss TPSD1 TSR3 GNPTG C16orf91 TPSAB1 UNKL BAIAP3 UBE2I PRSS29P

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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