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See other B4GALNT4 CNV Assays ›
Gene Symbol
B4GALNT4
Assay Reference Genome
Location

Chr.11:380151 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01848005_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 338707

Gene Name:

 beta-1,4-N-acetyl-galactosaminyltransferase 4

Gene Aliases:

 -

Location:

 Chr.11:369773-382117 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 17 - Intron 18
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B4GALNT4 NM_178537.4 NP_848632.2
XM_017017654.1 XP_016873143.1
AB089939.1 BAD06471.1
AK057774.1 BAB71566.1
BC131528.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IFITM2 IFITM3 MIR210HG IRF7 LOC101059906 HRAS PGGHG RNH1 SIGIRR IFITM1 PHRF1 PTDSS2 MIR210 B4GALNT4 CDHR5 ANO9 IFITM5 LRRC56 LMNTD2 PKP3 RASSF7 LOC143666
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MIR210HG IRF7 LOC101059906 HRAS MUC5B PANO1 EPS8L2 PNPLA2 DRD4 DEAF1 TSPAN4 B4GALNT4 MUC2 MUC5AC CHID1 PDDC1 LMNTD2 TMEM80 RNH1 AP2A2 SIGIRR LOC171391 PIDD1 MUC6 CRACR2B SLC25A22 SCT PHRF1 PTDSS2 POLR2L MIR210 CDHR5 LOC101927503 ANO9 MIR6744 TALDO1 RPLP2 CD151 CEND1 LRRC56 TOLLIP PKP3 SNORA52 RASSF7 LOC143666
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss B4GALNT4 ANO9 SIGIRR PKP3
esv28392 Chr.11:363975 - 403432 on Build GRCh38 Gain+Loss B4GALNT4 PKP3
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion PTDSS2 B4GALNT4 ANO9 RNH1 SIGIRR PKP3
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain B4GALNT4 ANO9 SIGIRR PKP3
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain MIR6743 IFITM2 IFITM3 SIRT3 PGGHG NLRP6 RIC8A SIGIRR IFITM1 BET1L PSMD13 PTDSS2 B4GALNT4 ODF3 ANO9 IFITM5 PKP3
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PTDSS2 B4GALNT4 ANO9 SIGIRR PKP3
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion MIR210HG IRF7 LOC101059906 HRAS PANO1 EPS8L2 PNPLA2 DRD4 DEAF1 TSPAN4 B4GALNT4 CHID1 PDDC1 LMNTD2 TMEM80 RNH1 AP2A2 SIGIRR LOC171391 PIDD1 CRACR2B SLC25A22 SCT PHRF1 PTDSS2 POLR2L MIR210 CDHR5 ANO9 TALDO1 RPLP2 CD151 CEND1 LRRC56 PKP3 SNORA52 RASSF7 LOC143666
dgv1507n54 Chr.11:368778 - 382912 on Build GRCh38 Loss B4GALNT4

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)


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