Hs01853597_cn

• Gene Symbol: B3GNT3
• Assay Reference Genome Location: Chr.19:17812705 on build GRCh38
• Cytoband: 19p13.11

Target Gene Details

• Entrez Gene ID: 10331
• Gene Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3
• Gene Aliases: B3GAL-T8, B3GN-T3, B3GNT-3, HP10328, TMEM3, beta3Gn-T3
• Location: Chr.19:17794828-17813576 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
B3GNT3	NM_014256.3	3	1849	NP_055071.2
	XM_011527626.2	3	1808	XP_011525928.1
	AB015630.1	3	1819	BAA76497.1
	AB049585.1	3	1804	BAB21531.1
	AK075434.1	4	1399
	AK075466.1	3	1824
	AK225421.1	3	1816
	AK225478.1
	AY358955.1	3	1804	AAQ89314.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv50n68	Chr.19:17671882 - 17842923 on Build GRCh38	Loss	INSL3 FCHO1 B3GNT3 MAP1S UNC13A JAK3

More Information

Additional Information:

For this assay, SNP(s) [rs73524248] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)

O-glycan processing
keratan sulfate biosynthetic process
poly-N-acetyllactosamine biosynthetic process

Function(s)

UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity