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See other AMDHD2 CNV Assays ›
Gene Symbol
AMDHD2
Assay Reference Genome
Location

Chr.16:2531021 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01887592_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 51005

Gene Name:

 amidohydrolase domain containing 2

Gene Aliases:

 CGI-14

Location:

 Chr.16:2520351-2531414 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AMDHD2 XM_017023262.1 11 2796 XP_016878751.1
XM_017023263.1 9 2784 XP_016878752.1
XM_017023264.1 10 2727 XP_016878753.1
XM_017023265.1 10 2694 XP_016878754.1
XM_017023266.1 10 2742 XP_016878755.1
XM_017023267.1 9 2738 XP_016878756.1

Target Gene Details

Entrez Gene ID:

 752014

Gene Name:

 cementum protein 1

Gene Aliases:

 CP-23, CP23

Location:

 Chr.16:2530035-2531408 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CEMP1 NM_001048212.3 1 388 NP_001041677.1
AY584596.1 1 388 AAT01221.1
BC146925.1 1 338
BC146926.1 1 338
BM681118.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication HBM IFT140 WASIR2 LOC105371049 UNKL WDR90 CHTF18 MEIOB LMF1 MIR6859-4 WFIKKN1 NUBP2 RPS2 MIR5587 POLR3K SPSB3 MRPL28 RPL3L BAIAP3 MIR3180-5 KCTD5 MIR662 LOC729652 ATP6V0C RNF151 NPW NARFL DECR2 LMF1-AS1 FAM173A TBL3 LOC105371184 MIR3677 PRSS27 CCNF NPRL3 C1QTNF8 CRAMP1 SOX8 FBXL16 RGS11 METRN SSTR5-AS1 TSC2 TELO2 STUB1 SSTR5 MIR4516 TBC1D24 LOC101929280 AXIN1 HBZ RPL23AP5 FLJ42627 GNG13 MIR3178 RAB11FIP3 MIR6511B1 SNORA78 TMEM8A ARHGDIG CCDC154 ERVK13-1 SNORA64 CASKIN1 SNHG9 LOC100134368 GFER MIR1225 RNPS1 LOC107984876 FAM234A RHOT2 MSRB1 WDR24 MIR6768 SYNGR3 HAGHL HS3ST6 RAB40C LINC00235 SNRNP25 PGP LOC107987233 EME2 TPSD1 LOC105371045 MCRIP2 LOC105371047 HBA1 ZNF598 LOC652276 MSLN C16orf59 NOXO1 ABCA3 PTX4 JMJD8 PIGQ NHLRC4 MIR940 FAHD1 PDIA2 LOC105371038 GNPTG NDUFB10 HN1L C16orf91 DDX11L10 CCDC78 BRICD5 CEMP1 TSR3 RPUSD1 PKD1 NTN3 TPSAB1 ABCA17P METTL26 TRAF7 NTHL1 SLC9A3R2 LINC00254 MIR4717 MIR3177 LUC7L PRSS29P CLCN7 MPG DNASE1L2 NME3 IGFALS TPSG1 NME4 SNHG19 RAB26 LOC100287175 TPSB2 PRR25 RHBDF1 MLST8 AMDHD2 HBA2 LOC106660606 SNORD60 E4F1 SNORA10 MRPS34 MIR6767 CACNA1H CAPN15 ECI1 TMEM204 RHBDL1 LOC105371046 HAGH PRR35 PDPK1 MIR3176 UBE2I MAPK8IP3 HBQ1
esv2760067 Chr.16:2486824 - 2820535 on Build GRCh38 Gain+Loss AMDHD2 ERVK13-1 KCTD5 SRRM2 ATP6V0C PRSS41 LOC652276 PRSS33 SRRM2-AS1 TBC1D24 CEMP1 FLJ42627 TCEB2 PDPK1 MIR3178 PRSS27 PRSS21
nsv833122 Chr.16:2501717 - 2663937 on Build GRCh38 Loss LOC652276 AMDHD2 ERVK13-1 TBC1D24 CEMP1 FLJ42627 PDPK1 MIR3178 ATP6V0C
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain PGP MIR4717 DNASE1L2 LOC105371049 TSC2 LOC652276 MIR4516 TBC1D24 SNHG19 C16orf59 RAB26 ABCA3 MIR3178 MIR6511B1 MLST8 AMDHD2 MIR940 MIR3180-5 CASKIN1 LOC729652 MIR1225 RNPS1 ATP6V0C LOC106660606 SNORD60 E4F1 MIR6767 ECI1 BRICD5 CEMP1 PKD1 NTN3 ABCA17P MIR6768 TRAF7 PDPK1 MIR3677 CCNF

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