Genomic Map
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Target Gene Details
Entrez Gene ID: | 29850 |
Gene Name: | transient receptor potential cation channel subfamily M member 5 |
Gene Aliases: |
LTRPC5, MTR1 |
Location: |
Chr.11:2403962-2423424 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 24 - Exon 25 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TRPM5 | NM_014555.3 | NP_055370.1 | ||
| XM_017017628.1 | XP_016873117.1 | |||
| AF177473.1 | AAF26288.1 | |||
| AJ270996.1 | CAB66342.1 | |||
| BC093787.1 | AAH93787.1 | |||
| BC093789.1 | AAH93789.1 | |||
| BC143351.1 | ||||
| BC143353.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv951287 | Chr.11:2396771 - 2475670 on Build GRCh38 | Deletion |
 TRPM5
CD81
TSSC4
KCNQ1
|
| nsv469928 | Chr.11:2294174 - 2473462 on Build GRCh38 | Loss |
CD81-AS1
TSPAN32
TRPM5
C11orf21
CD81
TSSC4
KCNQ1
|
| nsv509382 | Chr.11:2376150 - 2439195 on Build GRCh38 | Insertion |
CD81-AS1
TRPM5
CD81
TSSC4
|
| nsv553047 | Chr.11:1733170 - 2418537 on Build GRCh38 | Gain |
INS
H19
MRPL23-AS1
MIR4298
LINC01219
MIR483
CD81-AS1
IFITM10
IGF2-AS
MRPL23
MIR7847
TNNI2
LSP1
HOTS
C11orf21
TNNT3
CD81
LINC01150
TSPAN32
MIR4686
SYT8
MIR675
ASCL2
CTSD
TRPM5
IGF2
INS-IGF2
TSSC4
TH
SNORD131
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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