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See other ATP2B2 CNV Assays ›
Gene Symbol
ATP2B2
Assay Reference Genome
Location

Chr.3:10328575 on build GRCh38
Cytoband
3p25.3
Assay ID Hs01896941_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 491

Gene Name:

 ATPase plasma membrane Ca2+ transporting 2

Gene Aliases:

 PMCA2, PMCA2a, PMCA2i

Location:

 Chr.3:10324023-10707962 on Build GRCh38

Assay Gene Location:

 Within Exon 32
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2B2 NM_001001331.2 23 4410 NP_001001331.1
NM_001683.3 20 4275 NP_001674.2
XM_005265179.4 25 4594 XP_005265236.1
XM_006713175.3 25 4478 XP_006713238.1
XM_011533752.2 23 4383 XP_011532054.1
XM_017006481.1 26 4721 XP_016861970.1
XM_017006482.1 23 4412 XP_016861971.1
XM_017006483.1 21 4422 XP_016861972.1
XM_017006484.1 23 4385 XP_016861973.1
XM_017006485.1 24 4689 XP_016861974.1
XM_017006486.1 25 4744 XP_016861975.1
XM_017006487.1 22 4342 XP_016861976.1
XM_017006488.1 22 4596 XP_016861977.1
XM_017006489.1 23 4518 XP_016861978.1
XM_017006490.1 21 4436 XP_016861979.1
XM_017006491.1 22 4608 XP_016861980.1
XM_017006492.1 24 4603 XP_016861981.1
AB210008.1 20 4348
L00620.1 19 3854 AAA51893.1
L20977.1 22 4412 AAA50877.1
S95758.1 19 3539 AAA08376.1
X63575.1 22 4041 CAA45131.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion ATP2B2 ATG7 MIR885 SEC13 IRAK2 TATDN2 FANCD2 GHRLOS MIR378B HRH1 GHRL SLC6A11 VHL BRK1 VGLL4 ATP2B2-IT2 SLC6A1-AS1 TAMM41 FANCD2OS LINC00852 LINC00606 SLC6A1 LOC101927467
nsv508903 Chr.3:10275353 - 10401894 on Build GRCh38 Insertion ATP2B2 GHRL MIR885 SEC13 TATDN2 GHRLOS MIR378B LINC00852
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion ATP2B2 ATG7 SEC13 EMC3 TATDN2 FANCD2 MIR378B SLC6A11 VHL BRK1 SLC6A1-AS1 LOC401052 CIDECP TAMM41 FANCD2OS LINC00852 FANCD2P2 LOC101927467 MIR885 IRAK2 GHRLOS HRH1 GHRL VGLL4 ATP2B2-IT2 LINC00606 SLC6A1
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion ATP2B2 ATG7 MIR885 SEC13 IRAK2 TATDN2 FANCD2 GHRLOS MIR378B HRH1 GHRL SLC6A11 VHL BRK1 VGLL4 ATP2B2-IT2 SLC6A1-AS1 TAMM41 FANCD2OS LINC00852 LINC00606 SLC6A1 FANCD2P2 LOC101927467
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion ATP2B2 ATG7 MIR885 SEC13 IRAK2 TATDN2 FANCD2 GHRLOS MIR378B HRH1 GHRL SLC6A11 VHL BRK1 VGLL4 ATP2B2-IT2 SLC6A1-AS1 TAMM41 FANCD2OS LINC00852 LINC00606 SLC6A1 FANCD2P2 LOC101927467
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion ATP2B2 ATG7 SEC13 EMC3 TATDN2 FANCD2 MIR378B SLC6A11 VHL BRK1 SLC6A1-AS1 EMC3-AS1 LOC401052 CIDECP TAMM41 FANCD2OS LINC00852 FANCD2P2 LOC101927467 MIR885 IRAK2 GHRLOS HRH1 GHRL VGLL4 ATP2B2-IT2 LINC00606 SLC6A1

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