Genomic Map
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Target Gene Details
Entrez Gene ID: | 126129 |
Gene Name: | carnitine palmitoyltransferase 1C |
Gene Aliases: |
CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73 |
Location: |
Chr.19:49690672-49713731 on Build GRCh38 |
Assay Gene Location: | Within Exon 9 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CPT1C | NM_001136052.2 | 5 | 675 | NP_001129524.1 |
| NM_001199752.2 | 5 | 739 | NP_001186681.1 | |
| NM_001199753.1 | 5 | 675 | NP_001186682.1 | |
| NM_152359.2 | 4 | 606 | NP_689572.1 | |
| NR_108072.1 | 6 | 837 | ||
| XM_005258505.2 | 5 | 712 | XP_005258562.1 | |
| XM_005258506.4 | 4 | 628 | XP_005258563.1 | |
| XM_006723009.3 | XP_006723072.1 | |||
| XM_011526438.2 | 5 | 768 | XP_011524740.1 | |
| XM_011526439.2 | 5 | 832 | XP_011524741.1 | |
| XM_011526440.2 | 5 | 684 | XP_011524742.1 | |
| XM_017026265.1 | 5 | 731 | XP_016881754.1 | |
| XM_017026266.1 | 5 | 685 | XP_016881755.1 | |
| XM_017026267.1 | XP_016881756.1 | |||
| XM_017026268.1 | XP_016881757.1 | |||
| XM_017026269.1 | XP_016881758.1 | |||
| XM_017026270.1 | XP_016881759.1 | |||
| XM_017026271.1 | XP_016881760.1 | |||
| XM_017026272.1 | XP_016881761.1 | |||
| XM_017026273.1 | XP_016881762.1 | |||
| AF357970.1 | 4 | 564 | AAL99615.1 | |
| AK096516.1 | 6 | 833 | ||
| AK289713.1 | 5 | 731 | ||
| AK290092.1 | 5 | 647 | ||
| AK299866.1 | ||||
| AK309087.1 | 5 | 667 | ||
| BC029104.1 | 5 | 639 | AAH29104.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv469715 | Chr.19:49572544 - 49730286 on Build GRCh38 | Gain+Loss |
 BCL2L12
NOSIP
MIR5088
PRR12
IRF3
CPT1C
PRMT1
ADM5
SCAF1
RRAS
PRRG2
|
| nsv833865 | Chr.19:49572545 - 49730286 on Build GRCh38 | Gain+Loss |
BCL2L12
NOSIP
MIR5088
PRR12
IRF3
CPT1C
PRMT1
ADM5
SCAF1
RRAS
PRRG2
|
| nsv9739 | Chr.19:47901840 - 50143063 on Build GRCh38 | Gain+Loss |
SNAR-A1
CGB7
NTN5
PNKP
VRK3
RPS11
FAM83E
CYTH2
MAMSTR
SNORD35A
LOC105447645
RPL13A
RASIP1
BSPH1
FLT3LG
TBC1D17
TMEM143
FLJ26850
PRRG2
CA11
FGF21
SNAR-B1
ZNF114
PIH1D1
SNAR-C2
DBP
FTL
PTH2
SNAR-A14
TEAD2
SNAR-C5
SNAR-D
LOC105372430
SNAR-B2
SNAR-G1
BAX
AKT1S1
SNRNP70
CGB1
GYS1
CCDC155
SPACA4
CGB3
DHDH
MIR4749
GRIN2D
SNAR-A13
CPT1C
NUCB1-AS1
PTOV1-AS2
FUT1
CGB8
CD37
BCAT2
PLEKHA4
SNORD35B
SULT2B1
PTOV1-AS1
SNAR-A3
PLA2G4C-AS1
SNAR-A2
ZNF473
IRF3
TSKS
PPP1R15A
PRMT1
MIR6798
CARD8-AS1
SNAR-A8
HSD17B14
SNAR-C1
SNAR-A5
LHB
SNAR-G2
TRPM4
MIR150
LIG1
LIN7B
MIR5088
C19orf73
SNORD32A
SNAR-A12
SNORD34
SNAR-A9
ALDH16A1
RRAS
KCNA7
GFY
NOSIP
KDELR1
C19orf68
SPHK2
SCAF1
CABP5
PTOV1
KCNJ14
MIR4750
FUT2
NUCB1
SNAR-C4
CARD8
MIR4751
SNAR-A10
MIR6799
ELSPBP1
LOC101928295
MIR4324
PRR12
RCN3
SYNGR4
LOC100287477
EMP3
LMTK3
SNAR-C3
FUZ
SNAR-A11
SNAR-A6
MIR6800
PLA2G4C
DKKL1
AP2A1
SNORD33
RUVBL2
LOC101059948
HRC
IL4I1
SEC1P
ATF5
CGB2
SLC6A16
NTF4
TULP2
BCL2L12
IZUMO1
CGB5
ADM5
RPL18
FCGRT
SNAR-A4
SIGLEC16
NUP62
CCDC114
SNAR-A7
GRWD1
SLC17A7
SIGLEC11
MED25
PPFIA3
|
| nsv817854 | Chr.19:49618821 - 49726387 on Build GRCh38 | Gain |
BCL2L12
MIR5088
PRR12
IRF3
CPT1C
PRMT1
ADM5
SCAF1
RRAS
|
| nsv953600 | Chr.19:49555044 - 49938043 on Build GRCh38 | Deletion |
AKT1S1
FUZ
MIR5088
PNKP
MIR6800
AP2A1
RRAS
NOSIP
MIR4749
IL4I1
ATF5
TBC1D17
CPT1C
SCAF1
PTOV1-AS2
PTOV1
PRRG2
BCL2L12
MIR4750
PTOV1-AS1
MIR4751
IRF3
TSKS
PRMT1
ADM5
MIR6799
PRR12
NUP62
MED25
|
| nsv833864 | Chr.19:49551790 - 49733819 on Build GRCh38 | Gain |
BCL2L12
NOSIP
MIR5088
PRR12
IRF3
CPT1C
PRMT1
ADM5
SCAF1
RRAS
PRRG2
|
| nsv1160655 | Chr.19:49489110 - 49841830 on Build GRCh38 | Deletion |
FUZ
MIR5088
SNORD32A
RPS11
MIR6800
AP2A1
SNORD34
RRAS
SNORD35A
SNORD33
NOSIP
RPL13A
CPT1C
SCAF1
PRRG2
BCL2L12
SNORD35B
PTOV1-AS1
IRF3
TSKS
PRMT1
ADM5
MIR6799
FCGRT
PRR12
RCN3
MED25
MIR150
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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