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See other SLCO4A1 CNV Assays ›
Gene Symbol
SLCO4A1
Assay Reference Genome
Location

Chr.20:62656768 on build GRCh38
Cytoband
20q13.33
Assay ID Hs01903251_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 28231

Gene Name:

 solute carrier organic anion transporter family member 4A1

Gene Aliases:

 OATP-E, OATP1, OATP4A1, OATPE, OATPRP1, POAT, SLC21A12

Location:

 Chr.20:62642445-62690700 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLCO4A1 NM_016354.3 2 519 NP_057438.3
XM_005260203.2 2 516 XP_005260260.1
XM_011528792.2 2 516 XP_011527094.1
XM_017027826.1 2 500 XP_016883315.1
XM_017027827.1 2 516 XP_016883316.1
AB031051.1 1 405 BAA89288.1
AF104334.1 2 452 AAF15545.1
AF187817.1 1 314 AAG43447.1
AF205072.1 2 459 AAG42204.1
AK023410.1 2 461 BAB14566.1
BC015727.1 2 477 AAH15727.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422398 Chr.20:62207833 - 62674040 on Build GRCh38 Duplication ADRM1 CABLES2 C20orf166-AS1 GATA5 MIR1-1HG LOC105369209 SLCO4A1-AS1 MIR4758 LAMA5-AS1 RBBP8NL MIR1-1 LAMA5 HRH3 RPS21 SLCO4A1 OSBPL2 MIR133A2
nsv834026 Chr.20:62636291 - 62795287 on Build GRCh38 Loss NTSR1 LOC107987285 LOC107985428 LINC00659 SLCO4A1-AS1 SLCO4A1
nsv586496 Chr.20:62332390 - 62812195 on Build GRCh38 Gain CABLES2 NTSR1 OGFR-AS1 C20orf166-AS1 GATA5 MIR1-1HG SLCO4A1-AS1 OGFR MIR4758 LAMA5-AS1 RBBP8NL LOC107987285 LOC107985428 MIR1-1 LAMA5 RPS21 LINC00659 MRGBP SLCO4A1 MIR133A2
nsv586503 Chr.20:62645662 - 62776055 on Build GRCh38 Gain NTSR1 LOC107987285 LOC107985428 LINC00659 SLCO4A1-AS1 SLCO4A1
nsv953302 Chr.20:62345345 - 62831248 on Build GRCh38 Deletion CABLES2 NTSR1 OGFR-AS1 C20orf166-AS1 GATA5 MIR1-1HG SLCO4A1-AS1 OGFR LAMA5-AS1 RBBP8NL LOC107987285 LOC107985428 MIR1-1 LAMA5 RPS21 LINC00659 MRGBP SLCO4A1 MIR133A2 COL9A3
nsv428380 Chr.20:62632018 - 62935383 on Build GRCh38 Loss TCFL5 NTSR1 OGFR-AS1 DPH3P1 SLCO4A1-AS1 OGFR LOC107987285 LOC107985428 LINC00659 MRGBP SLCO4A1 DIDO1 COL9A3

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