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Gene Symbol
PRKAB2
Assay Reference Genome
Location

Chr.1:147158687 on build GRCh38
Cytoband
1q21.1
Assay ID Hs01907203_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 5565

Gene Name:

 protein kinase AMP-activated non-catalytic subunit beta 2

Gene Aliases:

 -

Location:

 Chr.1:147155106-147172589 on Build GRCh38

Assay Gene Location:

 Within Exon 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRKAB2 NM_005399.4 8 1881 NP_005390.1
NR_103870.1 6 1593
NR_103871.1 7 1714
XM_011509729.1 9 1918 XP_011508031.1
XM_017001697.1 7 1760 XP_016857186.1
AK023717.1 1 496
BC053610.1 8 1836 AAH53610.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv327n100 Chr.1:146028214 - 148860637 on Build GRCh38 Gain MIR6077 LOC101928979 LOC728989 MIR5087 NBPF12 LOC284561 LINC00624 NBPF14 RNU1-13P LOC105371226 LOC100996763 NBPF11 GPR89B RNVU1-3 PDZK1P1 LOC100996517 LINC01138 NBPF10 HYDIN2 NUDT4P1 LOC105371242 GJA8 CH17-408M7.1 RNVU1-7 LOC101927468 RNVU1-6 PDE4DIP CHD1L GJA5 PPIAL4G ACP6 LOC100505824 BCL9 NUDT4P2 LOC100132057 PRKAB2 NOTCH2NL RNVU1-8 PDIA3P1 RNVU1-1 FMO5 NBPF13P
nsv1005055 Chr.1:145642988 - 148991068 on Build GRCh38 Loss LOC728989 MIR5087 LOC284561 RNU1-13P POLR3GL GPR89B RNVU1-3 PDZK1P1 HYDIN2 NUDT4P1 GJA8 HFE2 RNVU1-7 RNVU1-6 PDE4DIP GJA5 ACP6 LOC100505824 BCL9 LOC100132057 ANKRD34A PRKAB2 PDIA3P1 POLR3C PDZK1 ANKRD35 RNVU1-1 FMO5 MIR6077 MIR6736 LOC101928979 NBPF12 LINC00624 NBPF14 PIAS3 LOC105371226 LOC100996763 NBPF11 TXNIP RBM8A LOC100996517 LINC01138 ITGA10 NUDT17 NBPF10 CD160 LOC105371242 CH17-408M7.1 GNRHR2 LOC101927468 PEX11B GPR89A CHD1L PPIAL4G RNF115 NUDT4P2 NOTCH2NL RNVU1-8 LIX1L NBPF13P
nsv1121713 Chr.1:147010816 - 147207577 on Build GRCh38 Deletion RNVU1-8 CHD1L LOC728989 PDIA3P1 FMO5 PRKAB2 NBPF13P
esv2761299 Chr.1:146068341 - 148926801 on Build GRCh38 Gain+Loss MIR6077 LOC728989 MIR5087 NBPF12 LOC284561 LINC00624 NBPF14 RNU1-13P LOC105371226 LOC100996763 NBPF11 GPR89B RNVU1-3 PDZK1P1 LOC100996517 LINC01138 NBPF10 HYDIN2 NUDT4P1 LOC105371242 GJA8 CH17-408M7.1 RNVU1-7 LOC101927468 PDE4DIP CHD1L GJA5 PPIAL4G ACP6 LOC100505824 BCL9 NUDT4P2 LOC100132057 PRKAB2 NOTCH2NL RNVU1-8 PDIA3P1 RNVU1-1 FMO5 NBPF13P
nsv509457 Chr.1:145948024 - 149021821 on Build GRCh38 Insertion MIR6077 LOC101928979 LOC728989 MIR5087 NBPF12 LOC284561 LINC00624 NBPF14 RNU1-13P LOC105371226 LOC100996763 POLR3GL NBPF11 GPR89B TXNIP RNVU1-3 PDZK1P1 LOC100996517 LINC01138 NBPF10 HYDIN2 NUDT4P1 LOC105371242 GJA8 CH17-408M7.1 HFE2 RNVU1-7 LOC101927468 RNVU1-6 PDE4DIP CHD1L GJA5 PPIAL4G ACP6 LOC100505824 BCL9 NUDT4P2 LOC100132057 ANKRD34A PRKAB2 NOTCH2NL RNVU1-8 PDIA3P1 LIX1L RNVU1-1 FMO5 NBPF13P
nsv1132304 Chr.1:146186094 - 148977674 on Build GRCh38 Duplication MIR6077 LOC728989 MIR5087 NBPF12 LOC284561 LINC00624 NBPF14 RNU1-13P LOC105371226 LOC100996763 NBPF11 GPR89B RNVU1-3 PDZK1P1 LOC100996517 LINC01138 HYDIN2 NUDT4P1 LOC105371242 GJA8 CH17-408M7.1 RNVU1-7 LOC101927468 PDE4DIP CHD1L GJA5 PPIAL4G ACP6 LOC100505824 BCL9 NUDT4P2 LOC100132057 PRKAB2 NOTCH2NL RNVU1-8 PDIA3P1 RNVU1-1 FMO5 NBPF13P
nsv1003688 Chr.1:146036817 - 148934526 on Build GRCh38 Gain MIR6077 LOC101928979 LOC728989 MIR5087 NBPF12 LOC284561 LINC00624 NBPF14 RNU1-13P LOC105371226 LOC100996763 NBPF11 GPR89B RNVU1-3 PDZK1P1 LOC100996517 LINC01138 NBPF10 HYDIN2 NUDT4P1 LOC105371242 GJA8 CH17-408M7.1 RNVU1-7 LOC101927468 RNVU1-6 PDE4DIP CHD1L GJA5 PPIAL4G ACP6 LOC100505824 BCL9 NUDT4P2 LOC100132057 PRKAB2 NOTCH2NL RNVU1-8 PDIA3P1 RNVU1-1 FMO5 NBPF13P
dgv66e199 Chr.1:146055970 - 149056514 on Build GRCh38 Deletion MIR6077 LOC101928979 LOC728989 MIR5087 NBPF12 LOC284561 LINC00624 NBPF14 RNU1-13P LOC105371226 LOC100996763 NBPF11 GPR89B RNVU1-3 PDZK1P1 LOC100996517 LINC01138 NBPF10 HYDIN2 NUDT4P1 LOC105371242 GJA8 CH17-408M7.1 NBPF9 RNVU1-7 LOC101927468 PDE4DIP CHD1L GJA5 PPIAL4G ACP6 LOC100505824 BCL9 NUDT4P2 LOC100132057 PRKAB2 NOTCH2NL RNVU1-8 PDIA3P1 RNVU1-1 FMO5 NBPF13P

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More Information


Additional Information:

For this assay, SNP(s) [rs141362213] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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