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See other TSR3 CNV Assays ›
Gene Symbol
TSR3
Assay Reference Genome
Location

Chr.16:1350816 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01913037_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115939

Gene Name:

 TSR3, acp transferase ribosome maturation factor

Gene Aliases:

 C16orf42

Location:

 Chr.16:1349240-1351872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSR3 NM_001001410.2 NP_001001410.1
BC013943.1 AAH13943.1
BC016699.1 AAH16699.1
BC017325.2 AAH17325.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain IFT140 BAIAP3 C16orf91 PTX4 UBE2I LOC105371045 TSR3 GNPTG CLCN7 CCDC154 TELO2 UNKL
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication NPW PRSS27 SNHG9 PDIA2 MIR3177 LOC100287175 ERVK13-1 HAGHL LOC652276 WDR90 SOX8 RAB26 DDX11L10 BAIAP3 RNF151 SNRNP25 ARHGDIG ZNF598 TBL3 RAB40C MPG PGP LINC00235 CAPN15 MEIOB PKD1 LOC106660606 LOC105371038 TBC1D24 SNORA64 SSTR5 WDR24 RHBDL1 TMEM8A MIR940 HBQ1 CRAMP1 MIR4717 PTX4 NME4 MIR6511B1 JMJD8 SNORA10 NDUFB10 GNPTG HBA1 TPSG1 RHOT2 HAGH RPL23AP5 RPS2 NTN3 LOC105371045 RAB11FIP3 SYNGR3 LOC729652 SSTR5-AS1 WFIKKN1 MIR6768 SNHG19 ECI1 WASIR2 GNG13 PIGQ C16orf59 TRAF7 CLCN7 HN1L MIR3178 MIR6859-4 FLJ42627 SNORD60 AMDHD2 LOC107984876 NUBP2 NPRL3 RGS11 METTL26 HBZ ABCA3 LOC105371047 ABCA17P LOC101929280 CHTF18 ATP6V0C FBXL16 TPSB2 NOXO1 MAPK8IP3 MRPL28 CACNA1H MIR1225 MSLN GFER MRPS34 NARFL MIR4516 RHBDF1 MIR3677 TSC2 UNKL PRR35 C16orf91 FAM173A UBE2I LOC100134368 SPSB3 PDPK1 NME3 CCDC154 MIR6767 POLR3K LINC00254 RNPS1 IGFALS MIR3176 CASKIN1 FAM234A MSRB1 SLC9A3R2 CCNF CEMP1 TPSAB1 CCDC78 METRN RPUSD1 IFT140 PRR25 NHLRC4 TSR3 KCTD5 LOC105371046 LUC7L DNASE1L2 TPSD1 MIR662 EME2 HBA2 LOC105371184 PRSS29P E4F1 LOC105371049 FAHD1 MIR3180-5 MCRIP2 HBM HS3ST6 BRICD5 TMEM204 MIR5587 LOC107987233 C1QTNF8 NTHL1 SNORA78 AXIN1 LMF1-AS1 LMF1 STUB1 RPL3L DECR2 MLST8 TELO2
nsv974746 Chr.16:1328043 - 1351866 on Build GRCh38 Duplication BAIAP3 TSR3
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LOC107984876 LOC105371045 TSR3 SSTR5-AS1 SSTR5 C1QTNF8 UNKL SOX8 TPSD1 BAIAP3 C16orf91 UBE2I LMF1-AS1 TPSB2 PRSS29P LMF1 GNPTG CLCN7 CCDC154 CACNA1H TPSG1 TPSAB1
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain TSR3 SSTR5-AS1 SSTR5 C1QTNF8 UNKL TPSD1 BAIAP3 UBE2I TPSB2 PRSS29P GNPTG CACNA1H TPSG1 TPSAB1
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss TSR3 SSTR5-AS1 SSTR5 C1QTNF8 UNKL SOX8 TPSD1 BAIAP3 UBE2I LMF1-AS1 TPSB2 PRSS29P LMF1 GNPTG CACNA1H TPSG1 TPSAB1
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion IFT140 LOC105371045 TSR3 TMEM204 LOC105371047 UNKL TPSD1 BAIAP3 C16orf91 PTX4 UBE2I TPSB2 PRSS29P GNPTG CLCN7 CCDC154 CACNA1H TPSG1 TELO2 TPSAB1
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss TPSD1 BAIAP3 C16orf91 UBE2I TSR3 PRSS29P GNPTG TPSAB1 UNKL

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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