Genomic Map
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Target Gene Details
Entrez Gene ID: | 4927 |
Gene Name: | nucleoporin 88 |
Gene Aliases: |
- |
Location: |
Chr.17:5384833-5419739 on Build GRCh38 |
Assay Gene Location: | Within Exon 18 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| NUP88 | NM_001320653.1 | 17 | 2388 | NP_001307582.1 |
| NM_002532.5 | 17 | 2340 | NP_002523.2 | |
| XM_011523893.2 | 18 | 2438 | XP_011522195.1 | |
| XM_017024694.1 | 18 | 2390 | XP_016880183.1 | |
| AK298158.1 | 18 | 2165 | ||
| BC000335.2 | 17 | 2253 | AAH00335.1 | |
| BF594453.1 | 1 | 179 | ||
| CX870338.1 | 4 | 423 | ||
| Y08612.2 | 17 | 2299 | CAA69904.1 |
Target Gene Details
Entrez Gene ID: | 9135 |
Gene Name: | rabaptin, RAB GTPase binding effector protein 1 |
Gene Aliases: |
RAB5EP, RABPT5 |
Location: |
Chr.17:5282263-5386340 on Build GRCh38 |
Assay Gene Location: | Within Exon 20 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| RABEP1 | NM_001083585.2 | 17 | 5672 | NP_001077054.1 |
| NM_001291581.1 | 17 | 5642 | NP_001278510.1 | |
| NM_004703.5 | 18 | 5771 | NP_004694.2 | |
| BM678290.1 | 1 | 175 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv574273 | Chr.17:4585589 - 5460332 on Build GRCh38 | Gain |
 PFN1
CXCL16
CHRNE
C1QBP
RNF167
DHX33
LOC101928000
ALOX15
LOC101559451
PLD2
NUP88
LOC100130950
ZFP3
SMTNL2
ZMYND15
RPAIN
LOC102724009
ZNF594
SPAG7
PSMB6
MED11
GP1BA
SLC52A1
CAMTA2
USP6
ARRB2
MINK1
SLC25A11
C17orf107
LOC107984973
SCIMP
LOC400568
PELP1
RABEP1
LOC101927979
INCA1
TM4SF5
MIR6864
MIR6865
GLTPD2
ENO3
VMO1
KIF1C
ZNF232
|
| nsv819549 | Chr.17:5386112 - 5388850 on Build GRCh38 | Loss |
NUP88
RABEP1
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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