Hs01919190_cn

• Gene Symbol: TRIM46
• Assay Reference Genome Location: Chr.1:155179688 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 80128
• Gene Name: tripartite motif containing 46
• Gene Aliases: GENEY, TRIFIC
• Location: Chr.1:155173714-155184971 on Build GRCh38
• Assay Gene Location: Within Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRIM46	NM_001256599.1	8	1532	NP_001243528.1
	NM_001256600.1	9	1476	NP_001243529.1
	NM_001256601.1	8	1363	NP_001243530.1
	NM_001282378.1	7	1260	NP_001269307.1
	NM_001282379.1	8	1522	NP_001269308.1
	NM_025058.4	8	1522	NP_079334.3
	NR_046327.1	9	1560
	NR_046329.1	10	1619
	NR_104150.1	9	1560
	XM_011510002.1	9	1465	XP_011508304.1
	XM_017002393.1	9	1636	XP_016857882.1
	AK026882.1	8	1433	BAB15580.1
	AK096158.1	8	1410
	AK128139.1	10	1619	BAC87293.1
	AK225075.1	8	1433
	AK296300.1	9	1472
	AK297318.1	7	1168
	AK304542.1	9	1404
	AK308075.1	8	1327
	AK309699.1	8	1363
	AK310429.1	11	1788
	AY251386.1	8	1342	AAP51206.1
	BC069416.1	9	1456	AAH69416.1
	BC069568.1	9	1456	AAH69568.1
	BC126372.1	9	1477

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527682	Chr.1:155177242 - 155227671 on Build GRCh38	Gain	MIR92B GBAP1 MUC1 TRIM46 MTX1 THBS3
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	MIR92B KRTCAP2 GBAP1 MUC1 FAM189B GBA TRIM46 MTX1 SCAMP3 THBS3
nsv8447	Chr.1:155172153 - 155184461 on Build GRCh38	Gain	KRTCAP2 TRIM46
nsv1010146	Chr.1:155146620 - 155231273 on Build GRCh38	Gain	MIR92B KRTCAP2 GBAP1 MUC1 TRIM46 MTX1 THBS3
nsv547961	Chr.1:155109822 - 155225189 on Build GRCh38	Loss	SLC50A1 MIR92B KRTCAP2 GBAP1 EFNA1 MUC1 TRIM46 DPM3 MTX1 THBS3
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	MIR92B LOC105371451 MUC1 FAM189B TRIM46 SCAMP3 PKLR RUSC1-AS1 THBS3 RUSC1 SLC50A1 KRTCAP2 ASH1L GBAP1 EFNA1 GBA DPM3 MTX1 FDPS HCN3 CLK2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s)

zinc ion binding