Genomic Map
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Target Gene Details
Entrez Gene ID: | 9013 |
Gene Name: | TATA-box binding protein associated factor, RNA polymerase I subunit C |
Gene Aliases: |
MGC:39976, SL1, TAFI110, TAFI95 |
Location: |
Chr.16:84177847-84187070 on Build GRCh38 |
Assay Gene Location: | Within Exon 8 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| TAF1C | NM_001243156.1 | 8 | 1046 | NP_001230085.1 |
| NM_001243157.1 | 5 | 680 | NP_001230086.1 | |
| NM_001243158.1 | 4 | 541 | NP_001230087.1 | |
| NM_001243159.1 | 8 | 885 | NP_001230088.1 | |
| NM_001243160.1 | 6 | 749 | NP_001230089.1 | |
| NM_005679.3 | 8 | 1046 | NP_005670.3 | |
| NM_139353.2 | 8 | 885 | NP_647610.2 | |
| XM_005256226.3 | 8 | 969 | XP_005256283.1 | |
| XM_005256227.3 | 8 | 880 | XP_005256284.1 | |
| XM_006721325.3 | 9 | 1061 | XP_006721388.1 | |
| XM_006721326.3 | 9 | 1061 | XP_006721389.1 | |
| XM_017023845.1 | 8 | 969 | XP_016879334.1 | |
| XM_017023846.1 | 7 | 830 | XP_016879335.1 | |
| XM_017023847.1 | 8 | 880 | XP_016879336.1 | |
| XM_017023848.1 | 3 | 653 | XP_016879337.1 | |
| AB209594.1 | 8 | 996 | BAD92831.1 | |
| AK097031.1 | 6 | 718 | ||
| AK299060.1 | 5 | 643 | ||
| AK299347.1 | 8 | 1017 | ||
| AK304261.1 | 8 | 867 | ||
| AK304739.1 | 9 | 998 | ||
| AK315982.1 | 4 | 528 | ||
| BC028131.1 | 8 | 864 | AAH28131.1 | |
| L39059.1 | 8 | 988 | AAA62861.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv3639413 | Chr.16:84172318 - 84253359 on Build GRCh38 | Loss |
 ADAD2
KCNG4
TAF1C
DNAAF1
|
| nsv833309 | Chr.16:84076867 - 84248591 on Build GRCh38 | Loss |
LOC729887
ADAD2
MBTPS1
KCNG4
TAF1C
HSDL1
DNAAF1
|
| nsv1065790 | Chr.16:83830329 - 84243597 on Build GRCh38 | Loss |
LOC729887
ADAD2
OSGIN1
LOC105371371
NECAB2
MLYCD
MBTPS1
KCNG4
TAF1C
HSDL1
DNAAF1
SLC38A8
|
| esv2761930 | Chr.16:84007420 - 84312461 on Build GRCh38 | Gain |
LOC729887
ADAD2
LOC105376777
MBTPS1
KCNG4
TAF1C
HSDL1
DNAAF1
SLC38A8
WFDC1
|
| nsv523437 | Chr.16:84176132 - 84196770 on Build GRCh38 | Loss |
ADAD2
TAF1C
DNAAF1
|
| nsv573423 | Chr.16:84179104 - 84190716 on Build GRCh38 | Loss |
TAF1C
|
| esv3639414 | Chr.16:84176251 - 84352273 on Build GRCh38 | Loss |
ADAD2
LOC105376777
KCNG4
TAF1C
DNAAF1
WFDC1
|
| esv3639412 | Chr.16:84170074 - 84221406 on Build GRCh38 | Loss |
ADAD2
KCNG4
TAF1C
DNAAF1
|
| nsv483044 | Chr.16:84166395 - 87066394 on Build GRCh38 | Gain |
LOC440390
LOC400548
KIAA0513
IRF8
LOC101928614
MTHFSD
FOXC2-AS1
LINC01082
MIR1910
C16orf74
WFDC1
ADAD2
KLHL36
USP10
MIR6774
LOC146513
GINS2
FOXL1
TAF1C
LINC01081
CRISPLD2
FAM92B
FLJ30679
TLDC1
LINC00311
LOC101928474
EMC8
LOC105376777
MIR5093
FENDRR
COX4I1
FOXF1
GSE1
ATP2C2
DNAAF1
LINC00917
LOC105371374
LOC102724344
KCNG4
ZDHHC7
LOC101928557
FOXC2
COTL1
|
| nsv1059227 | Chr.16:84029323 - 84233403 on Build GRCh38 | Loss |
LOC729887
ADAD2
MBTPS1
KCNG4
TAF1C
HSDL1
DNAAF1
SLC38A8
|
Back To TopMore Information
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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