Hs01941247_cn

• Gene Symbol: NCBP3
• Assay Reference Genome Location: Chr.17:3824991 on build GRCh38
• Cytoband: 17p13.2

Target Gene Details

• Entrez Gene ID: 55421
• Gene Name: nuclear cap binding subunit 3
• Gene Aliases: C17orf85, ELG, HSA277841
• Location: Chr.17:3806748-3846251 on Build GRCh38
• Assay Gene Location: Overlaps Intron 8 - Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NCBP3	NM_001114118.2			NP_001107590.1
	XM_005256717.2			XP_005256774.1
	XM_006721556.2			XP_006721619.1
	XM_011523954.2			XP_011522256.1
	XM_011523955.2			XP_011522257.1
	XM_017024826.1			XP_016880315.1
	XM_017024828.1			XP_016880317.1
	XM_017024829.1			XP_016880318.1
	AJ277841.1			CAB91001.1
	AK125048.1	4	315
	BP344033.1
	DA403386.1	4	315

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv520428	Chr.17:3822605 - 3835696 on Build GRCh38	Gain	NCBP3
nsv1065489	Chr.17:2631416 - 3948349 on Build GRCh38	Gain	MIR1253 OR1E1 PAFAH1B1 SPATA22 LOC105371592 OR1A1 OR1A2 P2RX5 OR3A1 GSG2 NCBP3 TAX1BP3 OR1D2 LOC105371591 OR1E2 TRPV1 OR1D5 OR3A2 LOC101927911 TRPV3 SHPK OR3A3 CTNS OR3A4P P2RX1 OR1D4 CCDC92B CAMKK1 RAP1GAP2 ASPA EMC6 ITGAE MIR6776 OR1G1 P2RX5-TAX1BP3 CLUH ATP2A3
nsv833343	Chr.17:3822173 - 3980223 on Build GRCh38	Loss	NCBP3 ATP2A3 P2RX1 CAMKK1
esv2761940	Chr.17:3767589 - 3997617 on Build GRCh38	Gain	NCBP3 ITGAE ATP2A3 P2RX1 CAMKK1
nsv469791	Chr.17:3700760 - 3885899 on Build GRCh38	Loss	GSG2 NCBP3 ITGAE CAMKK1
nsv1055740	Chr.17:3381841 - 3890153 on Build GRCh38	Gain	OR1E2 OR1E1 TRPV1 SPATA22 OR3A2 TRPV3 SHPK OR3A3 CTNS P2RX5 CAMKK1 GSG2 NCBP3 ASPA EMC6 ITGAE P2RX5-TAX1BP3 TAX1BP3

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

7-methylguanosine mRNA capping
mRNA transport
defense response to virus

Function(s)

nucleotide binding
RNA 7-methylguanosine cap binding
mRNA binding
protein binding
poly(A) RNA binding