Hs01979447_cn

• Gene Symbol: SNAP25
• Assay Reference Genome Location: Chr.20:10218829 on build GRCh38
• Cytoband: 20p12.2

Target Gene Details

• Entrez Gene ID: 6616
• Gene Name: synaptosome associated protein 25
• Gene Aliases: CMS18, RIC-4, RIC4, SEC9, SNAP, SNAP-25, SUP, bA416N4.2, dJ1068F16.2
• Location: Chr.20:10218694-10307420 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SNAP25	NM_001322903.1			NP_001309832.1
	NM_001322904.1			NP_001309833.1
	NM_001322905.1			NP_001309834.1
	NM_001322906.1			NP_001309835.1
	NM_001322907.1			NP_001309836.1
	NM_001322908.1			NP_001309837.1
	NM_001322909.1			NP_001309838.1
	NM_001322910.1			NP_001309839.1
	NM_003081.4			NP_003072.2
	NM_130811.3			NP_570824.1
	XM_017028022.1			XP_016883511.1
	XM_017028023.1	1	136	XP_016883512.1
	AK094560.1
	AK098347.1
	AK223617.1			BAD97337.1
	BI552777.1
	BI602062.1
	BI604120.1
	D21267.1			BAA22370.1
	DA072367.1
	DA162693.1	1	136

Target Gene Details

• Entrez Gene ID: 100131208
• Gene Name: SNAP25 antisense RNA 1
• Gene Aliases: -
• Location: Chr.20:10023812-10219506 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SNAP25-AS1	NR_040710.1
	AK124961.1
	DA318406.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522874	Chr.20:9918791 - 10838562 on Build GRCh38	Loss	SNAP25 SLX4IP LOC105372526 JAG1 MKKS SNAP25-AS1 LOC101929371 LOC101929395 ANKEF1 MIR6870
nsv952985	Chr.20:10217253 - 10219452 on Build GRCh38	Deletion	SNAP25 SNAP25-AS1
nsv833919	Chr.20:10035753 - 10230987 on Build GRCh38	Gain	SNAP25 SNAP25-AS1 ANKEF1
esv2674016	Chr.20:10216797 - 10220344 on Build GRCh38	Deletion	SNAP25 SNAP25-AS1

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

SNARE protein

Gene Ontology Categories:

Process(es)

neurotransmitter uptake
chemical synaptic transmission
neurotransmitter secretion
locomotory behavior
associative learning
regulation of neuron projection development
glutamate secretion
synaptic vesicle exocytosis
synaptic vesicle docking
synaptic vesicle priming
synaptic vesicle fusion to presynaptic active zone membrane
regulation of insulin secretion
long-term synaptic potentiation

Function(s)

SNAP receptor activity
protein binding
syntaxin-1 binding
calcium-dependent protein binding