Hs02006718_cn

• Gene Symbol: TRIM46
• Assay Reference Genome Location: Chr.1:155177201 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 80128
• Gene Name: tripartite motif containing 46
• Gene Aliases: GENEY, TRIFIC
• Location: Chr.1:155173714-155184971 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRIM46	NM_001256599.1			NP_001243528.1
	NM_001256600.1			NP_001243529.1
	NM_001256601.1			NP_001243530.1
	NM_001282378.1			NP_001269307.1
	NM_001282379.1			NP_001269308.1
	NM_025058.4			NP_079334.3
	NR_046327.1
	NR_046329.1
	NR_104150.1
	XM_011510002.1			XP_011508304.1
	XM_017002393.1			XP_016857882.1
	AK026882.1			BAB15580.1
	AK096158.1
	AK128139.1			BAC87293.1
	AK225075.1
	AK296300.1
	AK297318.1
	AK304542.1
	AK308075.1
	AK309699.1
	AK310429.1
	AY251386.1			AAP51206.1
	BC069416.1			AAH69416.1
	BC069568.1			AAH69568.1
	BC126372.1
	BX283909.1
	DB262381.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv527682	Chr.1:155177242 - 155227671 on Build GRCh38	Gain	GBAP1 TRIM46 MTX1 MIR92B MUC1 THBS3
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	FAM189B KRTCAP2 GBAP1 TRIM46 MTX1 MIR92B MUC1 THBS3 GBA SCAMP3
nsv8447	Chr.1:155172153 - 155184461 on Build GRCh38	Gain	KRTCAP2 TRIM46
nsv1010146	Chr.1:155146620 - 155231273 on Build GRCh38	Gain	KRTCAP2 GBAP1 TRIM46 MTX1 MIR92B MUC1 THBS3
nsv547961	Chr.1:155109822 - 155225189 on Build GRCh38	Loss	EFNA1 KRTCAP2 GBAP1 TRIM46 MTX1 MIR92B SLC50A1 MUC1 THBS3 DPM3
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	RUSC1 EFNA1 FAM189B GBAP1 SLC50A1 CLK2 THBS3 FDPS ASH1L PKLR KRTCAP2 RUSC1-AS1 TRIM46 MTX1 MIR92B MUC1 HCN3 GBA SCAMP3 LOC105371451 DPM3

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s)

zinc ion binding