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See other GFER CNV Assays ›
Gene Symbol
GFER
Assay Reference Genome
Location

Chr.16:1984761 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02016646_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2671

Gene Name:

 growth factor, augmenter of liver regeneration

Gene Aliases:

 ALR, ERV1, HERV1, HPO, HPO1, HPO2, HSS

Location:

 Chr.16:1984149-1987749 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GFER NM_005262.2 NP_005253.3
AF124603.1 AAD17327.1
AF124604.1 AAD17328.1
AF208342.1 AAG43494.1
AF306863.1 AAG38105.1
AY550027.1 AAS55642.1
BC002429.1 AAH02429.1
BC028348.2 AAH28348.2
U31176.1 AAA96390.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication IFT140 PIGQ FBXL16 EME2 LOC105371047 TPSG1 MRPL28 STUB1 LOC105371046 FLJ42627 C16orf91 HN1L LOC729652 MIR1225 METTL26 MPG LMF1-AS1 ABCA17P RAB26 RNF151 KCTD5 C16orf59 CAPN15 SNORA10 TSR3 LUC7L AMDHD2 MIR940 NARFL MSRB1 NUBP2 DNASE1L2 CCDC78 MIR6768 RPS2 MEIOB DECR2 TPSD1 ERVK13-1 SNRNP25 TPSB2 SPSB3 CHTF18 HBM GNPTG LOC101929280 TBL3 PRSS27 NME3 HAGHL SNORA64 DDX11L10 SNORD60 ZNF598 JMJD8 WASIR2 FAM234A PRSS29P SSTR5 RHOT2 WDR90 RAB11FIP3 HBA2 ABCA3 TMEM8A LOC105371184 LOC105371045 LOC107984876 MIR3176 TRAF7 ATP6V0C RNPS1 SYNGR3 MLST8 POLR3K MIR4717 SSTR5-AS1 SNORA78 SOX8 BAIAP3 UBE2I TELO2 HBZ PDIA2 MSLN UNKL CLCN7 E4F1 NPRL3 NPW PGP NOXO1 LOC107987233 RGS11 PDPK1 ARHGDIG WDR24 FAHD1 LINC00235 LOC652276 RAB40C MIR662 TSC2 MIR3677 AXIN1 GFER TPSAB1 HBA1 C1QTNF8 SLC9A3R2 MIR6767 CASKIN1 PRR25 LOC100287175 MCRIP2 NME4 LOC105371038 LOC100134368 NTHL1 IGFALS MIR3178 MIR5587 SNHG9 PTX4 METRN MRPS34 MIR4516 RPL23AP5 RHBDL1 MIR6511B1 SNHG19 MIR3177 WFIKKN1 MIR6859-4 TBC1D24 LOC105371049 CCDC154 RPUSD1 CCNF HS3ST6 BRICD5 PRR35 CRAMP1 LINC00254 NTN3 PKD1 ECI1 RPL3L GNG13 HAGH TMEM204 NHLRC4 CACNA1H CEMP1 HBQ1 RHBDF1 MAPK8IP3 LOC106660606 MIR3180-5 LMF1 NDUFB10 FAM173A
nsv521569 Chr.16:1971892 - 2035996 on Build GRCh38 Loss GFER ZNF598 NOXO1 SYNGR3 SLC9A3R2 TBL3 NPW
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss GFER SNORA78 SNORA10 SLC9A3R2 TBL3 SNORA64 NPW ZNF598 NOXO1 SYNGR3 RPS2 NDUFB10 SNHG9 RNF151
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion MIR4516 RPL3L GFER SNORA78 MIR6511B1 SNORA10 SLC9A3R2 TBL3 MSRB1 SNORA64 LOC105371049 NPW ZNF598 NOXO1 SYNGR3 RPS2 HS3ST6 MIR1225 NTHL1 NDUFB10 SNHG9 PKD1 RNF151 TSC2
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion GFER SNORA78 MIR6511B1 SNORA10 SLC9A3R2 TBL3 SNORA64 LOC105371049 NPW ZNF598 NOXO1 SYNGR3 RPS2 MIR1225 NTHL1 NDUFB10 SNHG9 PKD1 RNF151 TSC2
nsv471070 Chr.16:1947613 - 2024218 on Build GRCh38 Gain RPL3L GFER SNORA78 SNORA10 TBL3 SNORA64 NPW ZNF598 NOXO1 SYNGR3 RPS2 NDUFB10 SNHG9 RNF151
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss GFER SNORA78 ZNF598 NOXO1 SYNGR3 SLC9A3R2 TBL3 SNHG9 RNF151 NPW

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