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See other TRPV1 CNV Assays ›
Gene Symbol
TRPV1
Assay Reference Genome
Location

Chr.17:3566890 on build GRCh38
Cytoband
17p13.2
Assay ID Hs02049307_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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Online offer:
4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 7442

Gene Name:

 transient receptor potential cation channel subfamily V member 1

Gene Aliases:

 VR1

Location:

 Chr.17:3565446-3609411 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRPV1 NM_018727.5 16 2603 NP_061197.4
NM_080704.3 17 2720 NP_542435.2
NM_080705.3 16 2646 NP_542436.2
NM_080706.3 15 2972 NP_542437.2
AF196175.1 16 2658 AAG43466.1
AF196176.1 16 2644 AAG43467.1
AJ272063.2 16 2603 CAB89866.2
AJ277028.1 15 2972 CAB95729.1
AL136801.1 17 2716 CAB66735.1
AY131289.1 15 2445 AAM89472.1
AY986821.1 14 2265 AAX84657.1
BC132820.1 15 2924
BC136633.1 15 2924
DQ177332.1 14 2532 ABA06605.1
DQ177333.1 16 2495 ABA06606.1
DQ898279.1 15 2445

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3892950 Chr.17:3131812 - 3577153 on Build GRCh38 Loss OR1E1 OR3A4P SPATA22 OR1A2 OR3A2 OR3A1 ASPA OR1E2 OR1D4 TRPV3 OR3A3 TRPV1 OR1A1
esv3892951 Chr.17:3566559 - 3597215 on Build GRCh38 Gain TRPV1
nsv1055740 Chr.17:3381841 - 3890153 on Build GRCh38 Gain GSG2 SHPK P2RX5-TAX1BP3 OR1E1 EMC6 CTNS SPATA22 TAX1BP3 OR3A2 ASPA ITGAE CAMKK1 OR1E2 NCBP3 TRPV3 OR3A3 TRPV1 P2RX5
esv3572354 Chr.17:3528675 - 3654158 on Build GRCh38 Gain SHPK CTNS TRPV3 TRPV1
dgv556e214 Chr.17:3560499 - 3573090 on Build GRCh38 Loss TRPV1
nsv516676 Chr.17:3553441 - 3652130 on Build GRCh38 Gain+Loss SHPK CTNS TRPV3 TRPV1
nsv574237 Chr.17:3486822 - 3729542 on Build GRCh38 Loss GSG2 SHPK P2RX5-TAX1BP3 EMC6 CTNS SPATA22 TAX1BP3 TRPV3 TRPV1 P2RX5 ASPA ITGAE
nsv1065489 Chr.17:2631416 - 3948349 on Build GRCh38 Gain GSG2 SHPK OR3A4P SPATA22 TAX1BP3 ATP2A3 OR1D2 OR3A1 RAP1GAP2 MIR6776 OR1E2 CCDC92B NCBP3 OR1D5 OR1D4 TRPV1 P2RX1 LOC105371592 LOC101927911 P2RX5-TAX1BP3 OR1E1 LOC105371591 EMC6 CTNS OR1A2 OR3A2 ASPA ITGAE MIR1253 CAMKK1 OR1G1 PAFAH1B1 TRPV3 OR3A3 CLUH P2RX5 OR1A1
esv2662311 Chr.17:3561202 - 3568311 on Build GRCh38 Deletion TRPV1
nsv526175 Chr.17:3528392 - 3616421 on Build GRCh38 Gain SHPK TRPV3 TRPV1
esv3639746 Chr.17:3561030 - 3568136 on Build GRCh38 Loss TRPV1
esv3639748 Chr.17:3562752 - 3573090 on Build GRCh38 Gain TRPV1
nsv1060071 Chr.17:3398474 - 3633472 on Build GRCh38 Loss SHPK OR1E2 SPATA22 TRPV3 OR3A3 TRPV1 ASPA

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