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See other STUB1 CNV Assays ›
Gene Symbol
STUB1
Assay Reference Genome
Location

Chr.16:681275 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02061495_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10273

Gene Name:

 STIP1 homology and U-box containing protein 1

Gene Aliases:

 CHIP, HSPABP2, NY-CO-7, SCAR16, SDCCAG7, UBOX1

Location:

 Chr.16:680111-682768 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
STUB1 NM_001293197.1 2 787 NP_001280126.1
NM_005861.3 2 698 NP_005852.2
AF039689.1 2 339 AAC18038.1
AF129085.1 2 379 AAD33400.1
AF217968.1 2 674 AAG17211.1
AF432221.1 2 394 AAL99927.1
BC007545.1 2 382 AAH07545.1
BC017178.1 2 369 AAH17178.1
BC022788.1 2 382 AAH22788.1
BC063617.1 2 313 AAH63617.1
CB145452.1 2 207

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv827480 Chr.16:672775 - 685288 on Build GRCh38 Gain WDR24 JMJD8 STUB1 RHBDL1 RHOT2 LOC105371184
nsv482181 Chr.16:680115 - 682767 on Build GRCh38 Gain JMJD8 STUB1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR5587 ABCA3 DDX11L10 CLCN7 MIR6767 PDPK1 MIR4717 LINC00254 MIR3178 FLJ42627 NUBP2 WFIKKN1 SPSB3 DECR2 HBZ HS3ST6 KCTD5 SNRNP25 MRPL28 LOC101929280 POLR3K SSTR5 RPUSD1 TRAF7 LINC00235 STUB1 ZNF598 PKD1 LOC106660606 NPRL3 TMEM204 RAB40C NHLRC4 HBA1 HBA2 LOC105371046 MIR940 RPS2 LOC105371038 LUC7L TBL3 GFER SNORD60 CCDC78 TSC2 NME4 NDUFB10 RGS11 LMF1 PTX4 FAM234A LOC107987233 NOXO1 TELO2 C16orf91 IFT140 NTHL1 ATP6V0C SYNGR3 METTL26 RAB26 TBC1D24 LOC652276 CAPN15 UBE2I SLC9A3R2 MIR3180-5 SNHG9 PRR25 AMDHD2 ERVK13-1 MIR6511B1 MAPK8IP3 HBQ1 MIR4516 TPSB2 LOC107984876 AXIN1 LOC105371049 UNKL DNASE1L2 HN1L TPSD1 NME3 SNORA78 BAIAP3 MIR6859-4 RNF151 GNG13 IGFALS CHTF18 TPSAB1 CCNF SNORA10 MCRIP2 PRSS29P NARFL TPSG1 METRN MIR3176 ABCA17P EME2 MIR6768 MIR3177 LMF1-AS1 FAM173A C1QTNF8 BRICD5 LOC105371045 MIR1225 CCDC154 RPL3L RHBDL1 LOC100287175 LOC100134368 RAB11FIP3 NTN3 RHBDF1 WDR24 RNPS1 MSRB1 MPG CRAMP1 CACNA1H TSR3 SNHG19 MRPS34 RPL23AP5 SSTR5-AS1 FBXL16 ECI1 PDIA2 PGP LOC105371047 PRR35 HAGHL FAHD1 ARHGDIG CASKIN1 WDR90 WASIR2 MLST8 LOC105371184 TMEM8A E4F1 HAGH SNORA64 JMJD8 LOC729652 MEIOB MIR3677 CEMP1 PIGQ SOX8 NPW MSLN PRSS27 C16orf59 HBM RHOT2 MIR662 GNPTG
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss MIR5587 WDR24 FBXL16 WFIKKN1 CCDC78 PRR35 HAGHL WDR90 GNG13 LOC105371184 LOC107987233 LOC101929280 CHTF18 MCRIP2 RPUSD1 NARFL JMJD8 METTL26 METRN LINC00235 MIR3176 STUB1 PIGQ FAM173A RAB40C MSLN CAPN15 NHLRC4 PRR25 RHBDL1 RHOT2 MIR662 LOC105371038 LOC100287175 RAB11FIP3
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss MIR5587 WDR24 FBXL16 WFIKKN1 CCDC78 PRR35 HAGHL WDR90 GNG13 LOC105371184 LOC107987233 LOC101929280 CHTF18 MCRIP2 RPUSD1 NARFL JMJD8 METTL26 METRN LINC00235 MIR3176 STUB1 PIGQ FAM173A RAB40C MSLN CAPN15 NHLRC4 PRR25 RHBDL1 RHOT2 MIR662 LOC105371038 LOC100287175 RAB11FIP3
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion MIR5587 WDR24 LOC107984876 SSTR5-AS1 FBXL16 WFIKKN1 CCDC78 PRR35 HAGHL LMF1 WDR90 GNG13 LOC105371184 LOC107987233 LOC101929280 CHTF18 MCRIP2 SSTR5 RPUSD1 NARFL JMJD8 METTL26 METRN LINC00235 MIR3176 STUB1 PIGQ LMF1-AS1 FAM173A SOX8 C1QTNF8 RAB40C MSLN CAPN15 NHLRC4 PRR25 RHBDL1 RHOT2 MIR662 LOC105371038 LOC100287175 RAB11FIP3
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss WDR24 LOC101929280 MCRIP2 NARFL JMJD8 METTL26 METRN STUB1 FBXL16 PIGQ WFIKKN1 CCDC78 FAM173A RAB40C HAGHL RHBDL1 RHOT2 LOC105371038 LOC100287175 WDR90 LOC105371184
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication WDR24 FBXL16 WFIKKN1 CCDC78 HAGHL WDR90 GNG13 LOC105371184 LOC101929280 CHTF18 MCRIP2 RPUSD1 NARFL JMJD8 METTL26 METRN STUB1 PIGQ FAM173A RAB40C MSLN RHBDL1 RHOT2 MIR662 LOC105371038 LOC100287175
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication MIR5587 WDR24 FBXL16 WFIKKN1 CCDC78 PRR35 HAGHL WDR90 GNG13 LOC105371184 LOC107987233 LOC101929280 CHTF18 MCRIP2 RPUSD1 NARFL JMJD8 METTL26 METRN LINC00235 MIR3176 STUB1 PIGQ FAM173A RAB40C MSLN CAPN15 NHLRC4 PRR25 RHBDL1 RHOT2 MIR662 LOC105371038 LOC100287175 RAB11FIP3
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss WDR24 MCRIP2 NARFL JMJD8 METTL26 METRN STUB1 FBXL16 WFIKKN1 CCDC78 FAM173A RAB40C HAGHL RHBDL1 RHOT2 LOC105371038 LOC100287175 WDR90 LOC105371184
nsv457310 Chr.16:651656 - 681725 on Build GRCh38 Loss JMJD8 STUB1 RHBDL1 RHOT2 WDR90 LOC105371184
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain WDR24 MCRIP2 NARFL JMJD8 METTL26 METRN STUB1 FBXL16 WFIKKN1 CCDC78 FAM173A HAGHL RHBDL1 RHOT2 LOC105371038 LOC100287175 WDR90 LOC105371184
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss WDR24 NARFL JMJD8 METRN STUB1 FBXL16 CCDC78 FAM173A MSLN HAGHL RHBDL1 RHOT2 WDR90 LOC105371184
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss WDR24 CHTF18 MCRIP2 RPUSD1 NARFL JMJD8 METRN STUB1 FBXL16 CCDC78 FAM173A MSLN HAGHL RHBDL1 RHOT2 MIR662 LOC105371038 LOC100287175 WDR90 GNG13 LOC105371184

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)


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