Hs02084484_cn

• Gene Symbol: SEMA6C
• Assay Reference Genome Location: Chr.1:151131876 on build GRCh38
• Cytoband: 1q21.3

Target Gene Details

• Entrez Gene ID: 10500
• Gene Name: semaphorin 6C
• Gene Aliases: SEMAY, m-SemaY, m-SemaY2
• Location: Chr.1:151131685-151148408 on Build GRCh38
• Assay Gene Location: Within Exon 21

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SEMA6C	NM_001178061.1	20	3833	NP_001171532.1
	NM_001178062.1	19	3713	NP_001171533.1
	NM_030913.4	19	3737	NP_112175.2
	XM_017000077.1	21	5166	XP_016855566.1
	XM_017000079.1	20	5070	XP_016855568.1
	XM_017000081.1	20	5046	XP_016855570.1
	AB058772.1	19	5093
	AF339152.1	19	3530	AAL72098.1
	AF339153.1	19	3506	AAL72099.1
	AF339154.1	20	3626	AAL72100.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522840	Chr.1:150961247 - 151375270 on Build GRCh38	Gain	GABPB2 C1orf56 PRUNE1 TNFAIP8L2-SCNM1 PIP5K1A ZNF687 TMOD4 SETDB1 CDC42SE1 BNIPL CERS2 TNFAIP8L2 MLLT11 RFX5 LOC100507670 FAM63A ANXA9 LYSMD1 VPS72 SCNM1 SELENBP1 SEMA6C PSMD4 GBAT2 PI4KB

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane-bound signaling molecule, intercellular signal molecule

Gene Ontology Categories:

Process(es)

neural crest cell migration
axon guidance
positive regulation of cell migration
negative regulation of axon extension involved in axon guidance
negative chemotaxis
semaphorin-plexin signaling pathway

Function(s)

semaphorin receptor binding
chemorepellent activity