Hs02097028_cn

• Gene Symbol: AFG3L1P
• Assay Reference Genome Location: Chr.16:89990881 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 172
• Gene Name: AFG3 like matrix AAA peptidase subunit 1, pseudogene
• Gene Aliases: AFG3, AFG3L1
• Location: Chr.16:89972580-90000787 on Build GRCh38
• Assay Gene Location: Overlaps Intron 7 - Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AFG3L1P	NR_003226.1
	NR_003227.1
	NR_003228.1
	AF329691.1
	AF329692.1
	AK056488.1
	AK091293.1
	AK097044.1			BAC04933.1
	AK126911.1
	AK128352.1	1	550
	AK128804.1
	AL832984.1			CAH56313.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv573842	Chr.16:89964848 - 90038925 on Build GRCh38	Loss	GAS8 DEF8 AFG3L1P DBNDD1 GAS8-AS1 CENPBD1
esv3639603	Chr.16:89944533 - 90039438 on Build GRCh38	Gain	GAS8 DEF8 AFG3L1P DBNDD1 GAS8-AS1 CENPBD1
nsv471120	Chr.16:89977620 - 90063728 on Build GRCh38	Gain	GAS8 AFG3L1P DBNDD1 PRDM7 GAS8-AS1 URAHP
esv2762221	Chr.16:89610380 - 90039318 on Build GRCh38	Gain+Loss	SPATA2L VPS9D1 DEF8 AFG3L1P DBNDD1 LOC105371419 DPEP1 LOC107984817 CDK10 GAS8-AS1 CENPBD1 TCF25 CHMP1A GAS8 FANCA SPIRE2 TUBB3 ZNF276 VPS9D1-AS1 MC1R SPATA33
nsv573810	Chr.16:89857498 - 90037251 on Build GRCh38	Loss	TCF25 GAS8 DEF8 AFG3L1P DBNDD1 SPIRE2 TUBB3 GAS8-AS1 MC1R CENPBD1
nsv952080	Chr.16:89982593 - 90047992 on Build GRCh38	Deletion	GAS8 AFG3L1P DBNDD1 GAS8-AS1 URAHP
nsv428331	Chr.16:89216635 - 90185980 on Build GRCh38	Gain+Loss	DEF8 DBNDD1 PRDM7 LOC107984817 CDK10 FAM157C ANKRD11 CENPBD1 CHMP1A TUBB8P7 SPIRE2 TUBB3 SPG7 RPL13 LOC100287036 ZNF276 MC1R SPATA33 CPNE7 SPATA2L VPS9D1 AFG3L1P LOC101927817 LOC105371419 DPEP1 GAS8-AS1 LOC105371414 URAHP TCF25 GAS8 FANCA SNORD68 ZNF778 VPS9D1-AS1
nsv573799	Chr.16:89852186 - 90022379 on Build GRCh38	Gain	TCF25 GAS8 DEF8 AFG3L1P DBNDD1 LOC105371419 SPIRE2 TUBB3 MC1R CENPBD1
esv3892941	Chr.16:89941888 - 90002650 on Build GRCh38	Gain	DEF8 AFG3L1P CENPBD1
nsv471119	Chr.16:89957794 - 90083514 on Build GRCh38	Loss	GAS8 DEF8 AFG3L1P DBNDD1 PRDM7 GAS8-AS1 URAHP CENPBD1
nsv1066499	Chr.16:89891957 - 90028891 on Build GRCh38	Loss	TCF25 GAS8 DEF8 AFG3L1P DBNDD1 TUBB3 MC1R CENPBD1
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	SLC22A31 RNF166 SNAI3 CBFA2T3 DEF8 DBNDD1 PRDM7 CDH15 CTU2 CDK10 FAM157C IL17C ANKRD11 LOC107987238 MIR4722 CHMP1A TUBB8P7 LOC105371409 LOC339059 TUBB3 SPG7 RPL13 SPATA33 CPNE7 VPS9D1 LOC400558 TRAPPC2L AFG3L1P LOC101927817 PIEZO1 LOC105371419 DPEP1 LOC105371414 LOC100289580 GAS8 FANCA ACSF3 SNORD68 GALNS ZNF778 LOC107984817 LINC00304 SNAI3-AS1 LOC100129697 CENPBD1 MVD SPIRE2 CYBA LOC100287036 ZNF276 MC1R APRT SPATA2L CDT1 GAS8-AS1 URAHP LOC101927793 TCF25 PABPN1L VPS9D1-AS1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

metalloprotease