Hs02110322_cn

• Gene Symbol: SPATA2L
• Assay Reference Genome Location: Chr.16:89697385 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 124044
• Gene Name: spermatogenesis associated 2 like
• Gene Aliases: C16orf76, tamo
• Location: Chr.16:89696357-89701993 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPATA2L	NM_152339.3	3	1311	NP_689552.2
	XM_005256279.4	3	1728	XP_005256336.1
	AF070574.1	1	542
	AK127372.1	2	1115
	BC027606.1			AAH27606.1
	BC039608.1	3	1289	AAH39608.1
	BC053588.1	3	1293	AAH53588.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv952079	Chr.16:89685593 - 89749492 on Build GRCh38	Deletion	CDK10 SPATA2L ZNF276 FANCA VPS9D1 VPS9D1-AS1
nsv573743	Chr.16:89664419 - 89853617 on Build GRCh38	Gain	SPIRE2 CDK10 SPATA33 SPATA2L ZNF276 FANCA LOC107984817 VPS9D1 VPS9D1-AS1 LOC105371419
esv2762221	Chr.16:89610380 - 90039318 on Build GRCh38	Gain+Loss	SPIRE2 TUBB3 GAS8-AS1 ZNF276 LOC107984817 CENPBD1 AFG3L1P LOC105371419 MC1R DPEP1 CDK10 TCF25 DEF8 DBNDD1 CHMP1A GAS8 SPATA33 SPATA2L FANCA VPS9D1 VPS9D1-AS1
nsv516241	Chr.16:89696002 - 89723490 on Build GRCh38	Loss	CDK10 SPATA2L ZNF276 VPS9D1 VPS9D1-AS1
nsv428331	Chr.16:89216635 - 90185980 on Build GRCh38	Gain+Loss	SPIRE2 TUBB3 CENPBD1 URAHP AFG3L1P LOC105371419 DPEP1 CDK10 SNORD68 DEF8 FAM157C CHMP1A GAS8 SPATA33 VPS9D1 PRDM7 RPL13 VPS9D1-AS1 GAS8-AS1 ZNF276 LOC105371414 SPG7 LOC107984817 TUBB8P7 ANKRD11 MC1R TCF25 ZNF778 DBNDD1 LOC101927817 SPATA2L FANCA LOC100287036 CPNE7
nsv833330	Chr.16:89678466 - 89741783 on Build GRCh38	Loss	CDK10 SPATA2L ZNF276 FANCA VPS9D1 VPS9D1-AS1
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	SPIRE2 LOC339059 LOC105371409 LOC101927793 LOC100289580 APRT LOC107987238 CBFA2T3 URAHP AFG3L1P LOC105371419 DPEP1 CDK10 SLC22A31 SNORD68 CHMP1A GAS8 PRDM7 RPL13 PIEZO1 ACSF3 GAS8-AS1 LOC105371414 LOC107984817 ANKRD11 TRAPPC2L MC1R TCF25 CYBA PABPN1L TUBB3 LOC400558 LOC100129697 CENPBD1 MVD DEF8 IL17C FAM157C SPATA33 CDT1 LINC00304 VPS9D1 GALNS VPS9D1-AS1 SNAI3 ZNF276 RNF166 SPG7 TUBB8P7 CDH15 ZNF778 DBNDD1 LOC101927817 SPATA2L FANCA MIR4722 LOC100287036 CTU2 SNAI3-AS1 CPNE7
nsv509639	Chr.16:89513538 - 89775915 on Build GRCh38	Insertion	ZNF276 SPG7 DPEP1 CDK10 SNORD68 CHMP1A SPATA33 SPATA2L FANCA VPS9D1 RPL13 VPS9D1-AS1 CPNE7

More Information

• Set Membership: Intragenic, Exonic, DGV Variation