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See other TRIP6 CNV Assays ›
Gene Symbol
TRIP6
Assay Reference Genome
Location

Chr.7:100867424 on build GRCh38
Cytoband
7q22.1
Assay ID Hs02120646_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7205

Gene Name:

 thyroid hormone receptor interactor 6

Gene Aliases:

 OIP-1, OIP1, TRIP-6, TRIP6i2, ZRP-1

Location:

 Chr.7:100867328-100873454 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRIP6 NM_003302.2 1 97 NP_003293.2
AF000974.1 1 86 AAB62222.1
AJ001902.1 CAA05080.1
AK056773.1
AK291906.1
AK309312.1
BC002680.2 AAH02680.1
BC004249.1 AAH04249.1
BC004999.1 AAH04999.1
BC021540.1 AAH21540.1
BC028985.1 AAH28985.1
BM800083.1 1 97
CR749505.1 1 73 CAH18326.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759547 Chr.7:100757867 - 101105965 on Build GRCh38 Gain+Loss LOC102724094 SRRT UFSP1 MUC3A ACHE MIR6875 MUC12 EPHB4 TRIM56 MUC17 ZAN TRIP6 SLC12A9
nsv831073 Chr.7:100828037 - 100947257 on Build GRCh38 Loss SRRT UFSP1 TRIP6 SLC12A9 ACHE MIR6875
esv2734888 Chr.7:99975623 - 101290285 on Build GRCh38 Deletion PILRA PVRIG2P PMS2P1 PVRIG ZCWPW1 ACHE NAT16 C7orf61 NYAP1 COPS6 ZSCAN21 MOSPD3 TAF6 AZGP1P1 TRIP6 VGF PPP1R35 PCOLCE C7orf43 SRRT ACTL6B MIR25 CLDN15 UFSP1 STAG3 GIGYF1 MIR4653 MIR6875 MCM7 LRCH4 EPHB4 MUC17 ZAN SAP25 AGFG2 ZASP LOC102724094 CNPY4 GATS SPDYE3 SERPINE1 MIR6840 MOGAT3 MIR4658 PLOD3 MUC12 TSC22D4 EPO STAG3L5P-PVRIG2P-PILRB MEPCE LOC105375429 STAG3L5P SLC12A9 FIS1 ZNHIT1 POP7 ZNF3 TFR2 GNB2 GPC2 FBXO24 MUC3A ZKSCAN1 PCOLCE-AS1 TRIM56 MIR93 GAL3ST4 LAMTOR4 MIR106B AP1S1 AP4M1 AZGP1 MBLAC1 PILRB
nsv607965 Chr.7:100776465 - 100899511 on Build GRCh38 Loss ZAN SRRT UFSP1 TRIP6 SLC12A9 ACHE MIR6875 EPHB4
nsv5870 Chr.7:100845707 - 100875145 on Build GRCh38 Insertion SRRT TRIP6 SLC12A9 MIR6875
nsv607966 Chr.7:100824534 - 100920838 on Build GRCh38 Loss SRRT UFSP1 TRIP6 SLC12A9 ACHE MIR6875 EPHB4
nsv1020837 Chr.7:100715499 - 100911015 on Build GRCh38 Loss ZAN SRRT UFSP1 TRIP6 SLC12A9 ACHE MIR6875 EPO EPHB4

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More Information


Additional Information:

For this assay, SNP(s) [rs73714206] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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