Hs02126060_cn

• Gene Symbol: YTHDF1
• Assay Reference Genome Location: Chr.20:63196703 on build GRCh38
• Cytoband: 20q13.33

Target Gene Details

• Entrez Gene ID: 54915
• Gene Name: YTH N6-methyladenosine RNA binding protein 1
• Gene Aliases: C20orf21
• Location: Chr.20:63195429-63216186 on Build GRCh38
• Assay Gene Location: Overlaps Intron 4 - Exon 5

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
YTHDF1	NM_017798.3			NP_060268.2
	AB055518.1			BAB62751.1
	AK000398.1			BAA91138.1
	AK095795.1
	AK300073.1
	AL834366.1			CAD39029.1
	BC003681.1			AAH03681.1
	BC016920.2			AAH16920.2
	BC025264.1			AAH25264.1
	BC050284.1			AAH50284.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv519n27	Chr.20:63154307 - 63248817 on Build GRCh38	Loss	NKAIN4 BIRC7 MIR3196 YTHDF1 MIR124-3 LOC107985425
nsv953306	Chr.20:63151949 - 63571247 on Build GRCh38	Deletion	NKAIN4 LOC100130152 BIRC7 FNDC11 YTHDF1 LOC100130587 CHRNA4 COL20A1 MIR124-3 KCNQ2 PPDPF ARFGAP1 LOC102723788 MIR4326 MIR3196 SRMS HELZ2 PTK6 EEF1A2 LOC107985425 FLJ16779
dgv68n68	Chr.20:63076461 - 63224595 on Build GRCh38	Loss	LOC63930 YTHDF1 MIR124-3 HAR1B HAR1A
nsv586559	Chr.20:63195172 - 63248817 on Build GRCh38	Gain	NKAIN4 BIRC7 MIR3196 YTHDF1 LOC107985425
nsv828798	Chr.20:63194266 - 63202129 on Build GRCh38	Loss	YTHDF1
nsv9825	Chr.20:62775470 - 63601330 on Build GRCh38	Gain	COL9A3 LOC107985428 NKAIN4 DPH3P1 BIRC7 FNDC11 YTHDF1 LOC100130587 COL20A1 OGFR-AS1 PPDPF ARFGAP1 LOC102723788 BHLHE23 GMEB2 MIR3196 LOC63930 DIDO1 SRMS PTK6 TCFL5 LINC00659 LOC100130152 OGFR CHRNA4 LINC00029 MIR124-3 KCNQ2 HAR1A MIR4326 GID8 LINC01056 HELZ2 SLC17A9 HAR1B EEF1A2 MRGBP LOC107985425 FLJ16779
nsv834031	Chr.20:63132252 - 63245925 on Build GRCh38	Loss	NKAIN4 BIRC7 MIR3196 YTHDF1 MIR124-3 LOC107985425
esv2722892	Chr.20:63194513 - 63197931 on Build GRCh38	Deletion	YTHDF1

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

positive regulation of translational initiation

Function(s)

ribosome binding
poly(A) RNA binding
N6-methyladenosine-containing RNA binding