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See other JMJD8 CNV Assays ›
Gene Symbol
JMJD8
Assay Reference Genome
Location

Chr.16:683163 on build GRCh38
Cytoband
16p13.3
Assay ID Hs02145188_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 339123

Gene Name:

 jumonji domain containing 8

Gene Aliases:

 C16orf20, PP14397

Location:

 Chr.16:681666-684446 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
JMJD8 NM_001005920.2 NP_001005920.2
NM_001323918.1 NP_001310847.1
NM_001323919.1 NP_001310848.1
NM_001323920.1 NP_001310849.1
NM_001323922.1 NP_001310851.1
NR_136650.1
NR_136651.1
NR_136652.1
AF370420.1 AAQ15256.1
AL524336.3
AL524922.3
BC073785.1 AAH73785.1
BC094850.1 AAH94850.1
BC137100.1
BC137101.1
BG284477.1
BG423721.1
BG481039.1
BG826580.1
BI463867.1
BI767435.1
BX335015.2
DQ074695.1 AAY82251.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv827480 Chr.16:672775 - 685288 on Build GRCh38 Gain WDR24 LOC105371184 JMJD8 STUB1 RHBDL1 RHOT2
nsv482182 Chr.16:681667 - 684439 on Build GRCh38 Gain JMJD8 STUB1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SPSB3 CRAMP1 MIR3178 RPUSD1 DECR2 PDPK1 MIR3176 AMDHD2 HAGH DNASE1L2 DDX11L10 TSR3 MIR5587 FLJ42627 C16orf91 TPSAB1 CASKIN1 MCRIP2 FAM173A LOC105371049 NTN3 LUC7L RHBDF1 SNHG9 JMJD8 RAB40C HBA1 PRSS27 TMEM204 UNKL TELO2 HBA2 ABCA17P LOC100287175 MIR4717 RPS2 HBQ1 PKD1 LOC107987233 NME4 FAHD1 SYNGR3 CACNA1H MIR3177 RPL3L NTHL1 HS3ST6 BRICD5 CEMP1 CCDC154 HN1L MSLN MIR662 TPSB2 TPSD1 LMF1 SNHG19 NME3 ABCA3 PRSS29P RHBDL1 RAB26 RHOT2 MLST8 RNPS1 CLCN7 MIR6511B1 MRPL28 LOC106660606 NDUFB10 NUBP2 LOC105371046 RPL23AP5 LOC107984876 MIR940 WFIKKN1 TPSG1 PDIA2 WASIR2 HAGHL SSTR5-AS1 HBM AXIN1 LOC105371047 SNORA64 MIR4516 NPW LOC729652 LINC00235 METTL26 MIR6768 ERVK13-1 SSTR5 CAPN15 SLC9A3R2 LOC105371184 SNORA10 MSRB1 RAB11FIP3 UBE2I CHTF18 C16orf59 TMEM8A LINC00254 LOC105371038 MAPK8IP3 TBL3 MIR3180-5 KCTD5 BAIAP3 EME2 NHLRC4 RNF151 POLR3K MEIOB LOC105371045 ATP6V0C IGFALS HBZ SNRNP25 STUB1 ARHGDIG LOC101929280 IFT140 TSC2 MIR6859-4 SOX8 MIR1225 TRAF7 PIGQ RGS11 NPRL3 MIR6767 E4F1 LMF1-AS1 GNPTG MIR3677 PTX4 WDR90 NOXO1 NARFL SNORD60 LOC652276 FAM234A GNG13 SNORA78 C1QTNF8 LOC100134368 TBC1D24 MPG CCDC78 ZNF598 WDR24 MRPS34 CCNF METRN PGP ECI1 PRR35 PRR25 FBXL16 GFER
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss LOC107987233 LOC101929280 RPUSD1 LINC00235 METTL26 MIR3176 CAPN15 MSLN MIR662 PIGQ MIR5587 LOC105371184 RAB11FIP3 MCRIP2 CHTF18 FAM173A RHBDL1 LOC105371038 RHOT2 WDR90 NARFL JMJD8 RAB40C NHLRC4 GNG13 WFIKKN1 CCDC78 HAGHL WDR24 METRN LOC100287175 STUB1 PRR35 PRR25 FBXL16
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss CCDC78 NARFL HAGHL WDR24 METRN JMJD8 STUB1 FAM173A MSLN FBXL16
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss LOC107987233 LOC101929280 RPUSD1 LINC00235 METTL26 MIR3176 CAPN15 MSLN MIR662 PIGQ MIR5587 LOC105371184 RAB11FIP3 MCRIP2 CHTF18 FAM173A RHBDL1 LOC105371038 RHOT2 WDR90 NARFL JMJD8 RAB40C NHLRC4 GNG13 WFIKKN1 CCDC78 HAGHL WDR24 METRN LOC100287175 STUB1 PRR35 PRR25 FBXL16
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LOC107987233 LOC101929280 RPUSD1 LINC00235 SOX8 METTL26 SSTR5 MIR3176 CAPN15 MSLN MIR662 PIGQ MIR5587 LMF1 LOC105371184 RAB11FIP3 MCRIP2 CHTF18 FAM173A LMF1-AS1 RHBDL1 LOC105371038 RHOT2 WDR90 NARFL JMJD8 RAB40C LOC107984876 NHLRC4 GNG13 WFIKKN1 C1QTNF8 CCDC78 HAGHL WDR24 SSTR5-AS1 METRN LOC100287175 STUB1 PRR35 PRR25 FBXL16
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss LOC101929280 NARFL JMJD8 METTL26 RAB40C WFIKKN1 PIGQ CCDC78 HAGHL WDR24 LOC105371184 METRN LOC100287175 MCRIP2 STUB1 FAM173A RHBDL1 LOC105371038 FBXL16 RHOT2 WDR90
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication LOC101929280 RPUSD1 METTL26 MSLN MIR662 PIGQ LOC105371184 MCRIP2 CHTF18 FAM173A RHBDL1 LOC105371038 RHOT2 WDR90 NARFL JMJD8 RAB40C GNG13 WFIKKN1 CCDC78 HAGHL WDR24 METRN LOC100287175 STUB1 FBXL16
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication LOC107987233 LOC101929280 RPUSD1 LINC00235 METTL26 MIR3176 CAPN15 MSLN MIR662 PIGQ MIR5587 LOC105371184 RAB11FIP3 MCRIP2 CHTF18 FAM173A RHBDL1 LOC105371038 RHOT2 WDR90 NARFL JMJD8 RAB40C NHLRC4 GNG13 WFIKKN1 CCDC78 HAGHL WDR24 METRN LOC100287175 STUB1 PRR35 PRR25 FBXL16
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss NARFL JMJD8 METTL26 RAB40C WFIKKN1 CCDC78 HAGHL WDR24 LOC105371184 METRN LOC100287175 MCRIP2 STUB1 FAM173A RHBDL1 LOC105371038 FBXL16 RHOT2 WDR90
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain NARFL JMJD8 METTL26 WFIKKN1 CCDC78 HAGHL WDR24 LOC105371184 METRN LOC100287175 MCRIP2 STUB1 FAM173A RHBDL1 LOC105371038 FBXL16 RHOT2 WDR90
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss NARFL JMJD8 MSLN CCDC78 HAGHL WDR24 LOC105371184 METRN STUB1 FAM173A RHBDL1 FBXL16 RHOT2 WDR90
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss NARFL RPUSD1 JMJD8 GNG13 MSLN MIR662 CCDC78 HAGHL WDR24 LOC105371184 METRN LOC100287175 MCRIP2 CHTF18 STUB1 FAM173A RHBDL1 LOC105371038 FBXL16 RHOT2 WDR90

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

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