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See other B4GALT4 CNV Assays ›
Gene Symbol
B4GALT4
Assay Reference Genome
Location

Chr.3:119212000 on build GRCh38
Cytoband
3q13.32
Assay ID Hs02155558_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8702

Gene Name:

 beta-1,4-galactosyltransferase 4

Gene Aliases:

 B4Gal-T4, beta4Gal-T4

Location:

 Chr.3:119211742-119240946 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B4GALT4 NM_003778.3 8 2003 NP_003769.1
NM_212543.1 9 2086 NP_997708.1
XM_005247855.1 8 2061 XP_005247912.1
XM_006713798.2 9 2146 XP_006713861.1
XM_006713799.2 9 2191 XP_006713862.1
XM_006713800.1 8 2038 XP_006713863.1
XM_006713801.2 10 2229 XP_006713864.1
XM_011513260.1 10 2158 XP_011511562.1
XM_017007401.1 7 1853 XP_016862890.1
AF020920.1 7 1894 AAG50147.1
AF038662.1 7 1894 AAC39735.1
AK001006.1 9 2059
AK123182.1 1 1566
AL833580.1 1 4084
AY359008.1 6 1702 AAQ89367.1
BC062618.1 8 2225 AAH62618.1
BX647468.1 7 5534
CR749555.1 8 1986 CAH18352.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv591362 Chr.3:119187595 - 119229308 on Build GRCh38 Loss UPK1B B4GALT4-AS1 B4GALT4
esv25249 Chr.3:119136490 - 119281404 on Build GRCh38 Loss C3orf30 UPK1B B4GALT4-AS1 IGSF11 B4GALT4
esv3597553 Chr.3:119144924 - 119291446 on Build GRCh38 Loss C3orf30 UPK1B B4GALT4-AS1 IGSF11 B4GALT4

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More Information


Additional Information:

For this assay, SNP(s) [rs72655942] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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