Hs02171106_cn

• Gene Symbol: KCNQ1DN
• Assay Reference Genome Location: Chr.11:2870253 on build GRCh38
• Cytoband: 11p15.4

Target Gene Details

• Entrez Gene ID: 55539
• Gene Name: KCNQ1 downstream neighbor (non-protein coding)
• Gene Aliases: BWRT, HSA404617
• Location: Chr.11:2870033-2872105 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
KCNQ1DN	NR_024627.1	1	221
	AB039920.1	1	221
	AJ404617.2	1	191	CAB95125.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv825715	Chr.11:2855771 - 2890367 on Build GRCh38	Gain	KCNQ1-AS1 SLC22A18AS CDKN1C KCNQ1DN
nsv951292	Chr.11:2792271 - 2927870 on Build GRCh38	Deletion	SLC22A18 KCNQ1-AS1 SLC22A18AS CDKN1C KCNQ1DN KCNQ1
esv2759795	Chr.11:2767814 - 2942382 on Build GRCh38	Gain	SLC22A18 KCNQ1-AS1 SLC22A18AS CDKN1C PHLDA2 KCNQ1DN KCNQ1
nsv8765	Chr.11:2861205 - 2871450 on Build GRCh38	Gain+Loss	KCNQ1-AS1 KCNQ1DN
dgv1575n54	Chr.11:2863338 - 2899436 on Build GRCh38	Loss	SLC22A18AS CDKN1C KCNQ1DN
nsv469930	Chr.11:2831299 - 2924715 on Build GRCh38	Loss	SLC22A18 KCNQ1-AS1 SLC22A18AS CDKN1C KCNQ1DN KCNQ1
nsv1053066	Chr.11:2829552 - 2872696 on Build GRCh38	Gain	KCNQ1-AS1 KCNQ1DN KCNQ1
nsv832050	Chr.11:2868540 - 2963987 on Build GRCh38	Loss	SNORA54 SLC22A18 SLC22A18AS CDKN1C NAP1L4 PHLDA2 KCNQ1DN
nsv467655	Chr.11:2864498 - 2891716 on Build GRCh38	Loss	SLC22A18AS CDKN1C KCNQ1DN
nsv553111	Chr.11:2842057 - 2904391 on Build GRCh38	Loss	SLC22A18 KCNQ1-AS1 SLC22A18AS CDKN1C KCNQ1DN KCNQ1
dgv1574n54	Chr.11:2848935 - 2889391 on Build GRCh38	Loss	KCNQ1-AS1 SLC22A18AS CDKN1C KCNQ1DN KCNQ1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function