Hs02171568_cn

• Gene Symbol: SATB2
• Assay Reference Genome Location: Chr.2:199272215 on build GRCh38
• Cytoband: 2q33.1

Target Gene Details

• Entrez Gene ID: 23314
• Gene Name: SATB homeobox 2
• Gene Aliases: GLSS
• Location: Chr.2:199269500-199471266 on Build GRCh38
• Assay Gene Location: Within Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SATB2	NM_001172509.1	11	3015	NP_001165980.1
	NM_001172517.1	12	2611	NP_001165988.1
	NM_015265.3	12	2591	NP_056080.1
	XM_005246396.2	10	2246	XP_005246453.1
	XM_006712372.2	11	2361	XP_006712435.1
	XM_011510840.2	12	2585	XP_011509142.1
	XM_017003656.1	11	2246	XP_016859145.1
	AB028957.1	11	2284
	AB209376.1	12	2611	BAD92613.1
	AK056638.1	11	3016
	AK291463.1	12	2597
	BC098136.1	10	2249	AAH98136.1
	BC099723.1	10	2249	AAH99723.1
	BC103492.1	7	1895	AAI03493.1
	BC103500.1	10	2249	AAI03501.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3104	Chr.2:199264502 - 199299835 on Build GRCh38	Insertion	SATB2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

helix-turn-helix transcription factor, DNA-binding transcription factor, Lambda repressor-like transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

negative regulation of transcription from RNA polymerase II promoter
neuron migration
osteoblast development
chromatin remodeling
transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
embryonic pattern specification
covalent chromatin modification
commitment of neuronal cell to specific neuron type in forebrain
positive regulation of transcription from RNA polymerase II promoter
embryonic skeletal system morphogenesis
cartilage development
palate development
cellular response to organic substance

Function(s)

chromatin binding
protein binding
sequence-specific DNA binding